Gene detail information of Glyur002919s00046292 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22990.1 | 3.00E-44 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004513852.1 | 7.72E-85 | PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 5.00E-40 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|C6T4C4|C6T4C4_SOYBN | 2.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G21280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02919 | 25123 | 27183 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002919s00046292.1 | PF00403.21 | HMA | 29 | 84 | 1.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.842 |
| SRR1783600 | control | 0.956 |
| SRR1783602 | moderate drought stress | 0.321 |
| SRR1811619 | moderate drought stress | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.160 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.032 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 99.694 |
| SRR2868004 | Drought Stress (root) | 99.307 |
| SRR2967015 | Control (root) | 101.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.943 |
| SRR9715743 | Root | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.074 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.257 |
| SRR8749030 | Uninduced | 0.514 |
| SRR8749031 | Uninduced | 1.998 |
| SRR8749032 | Uninduced | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.275 |
| SRR8400027 | Control - Root | 22.881 |