Gene detail information of Glyur002918s00034907 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63855.3 | 4.00E-75 | Putative methyltransferase family protein |
| NR | AES95198.2 | 6.70E-135 | methyltransferase family protein, putative [Medicago truncatula] |
| COG | YP_005009131.1 | 4.00E-08 | methyltransferase-16 [Niastella koreensis GR20-10] |
| trEMBL | tr|G7JXM7|G7JXM7_MEDTR | 2.00E-135 | Methyltransferase family protein, putative {ECO:0000313|EMBL:AES95198.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02918 | 14975 | 16639 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002918s00034907.1 | PF10294.4 | Methyltransf_16 | 35 | 168 | 7.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.144 |
| SRR1783600 | control | 5.760 |
| SRR1783602 | moderate drought stress | 9.211 |
| SRR1811619 | moderate drought stress | 9.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.669 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.397 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.092 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.724 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.829 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.164 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.914 |
| SRR2868004 | Drought Stress (root) | 28.556 |
| SRR2967015 | Control (root) | 24.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.838 |
| SRR9715740 | Leaf | 9.147 |
| SRR9715741 | Leaf | 15.455 |
| SRR9715739 | Root | 5.155 |
| SRR9715742 | Root | 4.185 |
| SRR9715743 | Root | 3.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.421 |
| SRR8749028 | MeJA induced 9h | 9.077 |
| SRR8749029 | MeJA induced 9h | 5.500 |
| SRR8749030 | Uninduced | 7.152 |
| SRR8749031 | Uninduced | 2.933 |
| SRR8749032 | Uninduced | 3.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.689 |
| SRR8400027 | Control - Root | 14.279 |