Gene detail

Gene detail information of Glyur002918s00034906.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G42180.1	8.00E-117	Peroxidase superfamily protein
NR	XP_003517158.1	0	PREDICTED: peroxidase 64 [Glycine max]
Swissprot	tr\|Q43872\|PER64_ARATH	4.00E-153	Peroxidase 64 (Precursor)
trEMBL	tr\|I1J8H7\|I1J8H7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G36780.1}

Sequence

Transcript Sequence

>Glyur002918s00034906.1
ATTTATTCTGACCGAGAGTAACATGGTCCACATCACCAAATCTCCAACCCCGCGCACAAAAGAACGAGGAACATTATAAGCCAGAGAAGGATTGAACCTTCACTCAGTCCGCGGACCATAAAGTGGATTGTCTTTTTGTAATGAGAATGCTTAAACATTACTACTCCATTGACAATACTAGTTAACGAATTGATTTTCTAGCTAGGGCCACATTATCTCATACAATAATTAATCTCTTTTATCTCTATAAAAGCCATGTCATCCCTCTTTGATTTCCATAGATAAAAGCTAAAAATCATCAAGTACTCTTAATTGCCATGGCTATCANGGTTGCATTCTTGAGTTTGATTACCATGCTTTCAGTAGTTTCTACAGGCAAGTCACTGAGCTTAAACTACTATGAAAAGACATGCCCTAATCTGGAGTTCATTGTTGCCAAGGCAGTGAAGGATGCCACTGCCAAGGACAAGACTGTTCCAGCAGCACTTCTGAGAATGCACTTCCATGACTGCTTCATTCGGGGTTGTGATGCCTCTGTGCTGCTAAATTCAAAAGGAAACAACAAAGCAGAAAAAGACGGACCACCAAACGTTTCTCTGCATGCATTCTATGTCATTAATGAAGCAAAGAAAGCTGTAGAAGCTTCATGCCCTGGTGTGGTCTCTTGTGCTGATATTCTTGCTCTAGCAGCAAGGGACGCAGTTTTTCTGTCTGGAGGACCTAGATGGGATGTTCCTAAAGGAAGAAAGGACGGAAGAACATCTAAGGCCAGTGAAACCATAAAATTACCGGCACCAACATTCAACATATCACAACTGCAGCAAAGCTTCTCTCAAAGAGGATTGTCGTTGGAAGACCTGGTAGCTCTTTCAGGAGGGCATACTTTNGGTTTCTCTCACTGCTCATCTTTCCGGAACAGAATCCACAACTTTGATGCTACACATGATGTGGACCCTTTATTAAACCCGTCATTTGCAGCAAAACTAAAATCAATTTGTCCATTAAAAAATCAGGCAAAAAATGCAGGCACCATTATGGACCCTTCTTCAACAACTTTCGATAATACATATTACAAGTTGATCCTCCAGCGGAAAGCCCTGTTTTCTTCTGATCAAGCTTTGCTTGATATCCCAAAAACCAACCATCTGGTTTCTAAGTTTGCCACCTCAAGAGAGGCTTTCTATGAGGCTTTTGTGAAGTCCATGATCAAAATGGGTAGCATCAATGGTGGGCAAGAAGTTAGGAAGGACTGCAGAGTGGTCAATTAGAAAGTCTTATTTTAATTCAAGTTAAATGATGATATTCCAAACAATTTAAAAGTATGAAAGTGGTGGATCAAATTTTCAAGATGGTAAGAATATTAATTATTTTTCCTTTATAAAAGAAATATGTATACTTATCTCAATGTAATAAAAGCCCAAGCTTGTATTGGGAAATCAATTTAGAACCTAGTTATTATAAAATATATCATTTTGGTAGTCTTAAGTAATGAGCCAGGAAAGGTGCNGCTCAGCCACATGACCTTGGCAGCCCTGCTTCTTCAAGCGATGATTTTCTTGGTAAATGTAACTACCAGAGTCTACAATTTGAAATAGCAGATATGAATGCAAAAATCAACATTTTATTACGATTCAAAGTAATTATAAGGGTTCTGGGCTTCACCATTTCNCAGCACAGCAAATATCAACATGTAAGCATTTCAATTATTGTATGATAAAATGCCTAGTTATTCTCAAGAGTAAATCAAATCAAGCCCAAATATAATTCTTAAACCTGTTGAAATAAATAAAGCTGGAAAATTCCTTAATGAGTGCAATCCCGGTTCCCATCCACAAAGTTTGCTACTTGCTACCATGTTTTAATATTAAGCAACAATGAAATAAAATGGAAACCTATTTTTTCTTCATCTAGTTATAGCAGAAAAGTATGATATTCATTTTAGGAGGTATTCCTTTAGGATGATCATGTCGTATTCTACCATGATCATCAACAAGAAGAACAACATAGATGGCAGCAGCAGAAGCATCACCTAAAAATATAAACACCCAAAATTTATTATAAAACTTTGAGCTACCTCAAGCATTATCTTCCGACATAAGAGCTATCTCTGCCAATTGAATGTTACCACTTAGCTGAGATGCCTTGTAGGATGGCAGGATAGAAAACCCATCAAGAAGCTTGAGACACTTTAAGCCCCATTTCCCCATCAAGAACTCAATAAGGTGATGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02918	12508	15128	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002918s00034906.1	PF00141.18	peroxidase	39	284	6.20E-73

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.212
SRR1783600	control	4.364
SRR1783602	moderate drought stress	4.722
SRR1811619	moderate drought stress	4.680

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.757
DRR006520	Root Summer glycyrrhizin high producing strain	15.378
DRR006521	Root Winter glycyrrhizin high producing strain	0.546
DRR006522	Root Winter glycyrrhizin high producing strain	0.627
DRR006523	Root Summer glycyrrhizin low producing strain	6.177
DRR006524	Root Summer glycyrrhizin low producing strain	6.223
DRR006525	Leaf Summer glycyrrhizin high producing strain	28.285
DRR006526	Leaf Summer glycyrrhizin high producing strain	28.252

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.017
SRR2868004	Drought Stress (root)	11.075
SRR2967015	Control (root)	9.536

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.523
SRR9715740	Leaf	6.353
SRR9715741	Leaf	6.434
SRR9715739	Root	0.866
SRR9715742	Root	11.710
SRR9715743	Root	9.850

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.581
SRR8749028	MeJA induced 9h	1.329
SRR8749029	MeJA induced 9h	2.136
SRR8749030	Uninduced	1.748
SRR8749031	Uninduced	0.616
SRR8749032	Uninduced	1.158

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.977
SRR8400027	Control - Root	43.998