Gene detail information of Glyur002907s00033936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49720.2 | 7.00E-61 | |
| NR | AFK43601.1 | 2.54E-115 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9M2Y6|Y3972_ARATH | 7.00E-83 | Uncharacterized protein At3g49720 |
| trEMBL | tr|I3STK9|I3STK9_LOTJA | 9.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:AFK43601.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02907 | 11661 | 14688 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.652 |
| SRR1783600 | control | 20.879 |
| SRR1783602 | moderate drought stress | 9.577 |
| SRR1811619 | moderate drought stress | 9.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.235 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 85.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 84.293 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.932 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.630 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.946 |
| SRR2868004 | Drought Stress (root) | 49.517 |
| SRR2967015 | Control (root) | 42.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.853 |
| SRR9715740 | Leaf | 34.602 |
| SRR9715741 | Leaf | 34.308 |
| SRR9715739 | Root | 24.248 |
| SRR9715742 | Root | 31.679 |
| SRR9715743 | Root | 31.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.519 |
| SRR8749028 | MeJA induced 9h | 58.475 |
| SRR8749029 | MeJA induced 9h | 38.177 |
| SRR8749030 | Uninduced | 23.059 |
| SRR8749031 | Uninduced | 32.942 |
| SRR8749032 | Uninduced | 26.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.493 |
| SRR8400027 | Control - Root | 66.140 |