Gene detail

Gene detail information of Glyur002907s00033934

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G07990.2	8.00E-36	Chaperone DnaJ-domain superfamily protein
NR	XP_004498940.1	1.45E-79	PREDICTED: uncharacterized protein LOC101492876 [Cicer arietinum]
COG	YP_007714242.1	2.00E-09	Chaperone protein DnaJ [Candidatus Methanomethylophilus alvus Mx1201]
Swissprot	tr\|Q9LYW9\|DNJ36_ARATH	6.00E-08	DnaJ protein P58IPK homolog (Precursor)
trEMBL	tr\|K7M5T6\|K7M5T6_SOYBN	5.00E-80	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G10300.3}

Sequence

Transcript Sequence

>Glyur002907s00033934.1
GTCCCAACATTATTACTTGATAGAGGTTTAATTGGATTATGAACATATGTTTTTCCTCTTATGCTTTNCAGGTGTTTTGTTTTGTATGAGAAGTTAATTAATTTTTTTTTCATATCTTTGAACTACAAGCAAGAGATGTGAATCACAGTGAAACTGATCATGCATGCTATTATTGAACTCTTTGTAGCTGTCCAAGTCGCTGAAAGGAGGGAGTGGCAGTTCTTTCCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGATTGCAAGAGGAGTACGAGGAAGAAATGGAGAGAGTTGAAAGAATAAGGCGTATGCAAAATGTGTTTAATAGAGAAAGGAATAACTTTAGAAGAAGCCGCGAGAACTGGAGGGAAAATGGTCCTGGTGCATATCATCAGCATTTCCAGAGAGATGATTGGTATTGGAAGGCCGAACAAACCTTCAAAGACCAGTGGAACAACTATCGAGACACTCCAAGAGAGAGCAGAAACTATTCATTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACAACACCATATACAGAGGCTGAGATTAAGACAGCATTTAGGACCAAGGCAAAGCAGTATCATCCTGACCAGAACCAGGAAAATAGAGAGGCTGCTGAGGCTAAGTTCAAAGAAGTGATGTGTTCATATGAGGCCATACAACAAGAAAGAAAAAACCAAAATCTGTAATTGCCTAACTCTGCTTGACAATCCTGGGACCTTGAAGTTTGCGAGGTATTCAATATAATCATAATTTTGGGATGTTATTGCATAATAGTAGTGTTGTATTATAAGGATGTTACCATTGGTGGCATTGAATTTTTTTATTTTTGGAAAGTTTAGAACAGACAGTGTGACGGCTGTAATTTAATTATGCTCAGTTAATGTAATATAATGAACAGAAGACATTCTCTTCAGCTAAGTCAATACCCAGAAATTTATCTTTCATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02907	128	2954	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002907s00033934.1	PF00226.26	DnaJ	75	138	3.00E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.107
SRR1783600	control	5.085
SRR1783602	moderate drought stress	8.616
SRR1811619	moderate drought stress	8.547

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.629
DRR006520	Root Summer glycyrrhizin high producing strain	12.588
DRR006521	Root Winter glycyrrhizin high producing strain	16.961
DRR006522	Root Winter glycyrrhizin high producing strain	18.463
DRR006523	Root Summer glycyrrhizin low producing strain	15.175
DRR006524	Root Summer glycyrrhizin low producing strain	14.953
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.744
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.054

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.964
SRR2868004	Drought Stress (root)	19.966
SRR2967015	Control (root)	13.877

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.484
SRR9715740	Leaf	10.190
SRR9715741	Leaf	16.277
SRR9715739	Root	0.467
SRR9715742	Root	3.568
SRR9715743	Root	3.135

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.174
SRR8749028	MeJA induced 9h	13.032
SRR8749029	MeJA induced 9h	19.636
SRR8749030	Uninduced	43.353
SRR8749031	Uninduced	81.525
SRR8749032	Uninduced	47.942

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.595
SRR8400027	Control - Root	13.970