Gene detail information of Glyur002905s00040692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN46414.1 | 9.86E-32 | Abscisic stress-ripening protein 2 [Glycine soja] |
| Swissprot | tr|P37219|ASR2_SOLLC | 5.00E-20 | Abscisic stress-ripening protein 2 |
| trEMBL | tr|Q2TUW1|Q2TUW1_SOYBN | 6.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02905 | 12246 | 13615 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002905s00040692.1 | PF02496.11 | ABA_WDS | 30 | 108 | 1.20E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.369 |
| SRR1783600 | control | 0.227 |
| SRR1783602 | moderate drought stress | 0.156 |
| SRR1811619 | moderate drought stress | 0.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.195 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.028 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.159 |
| SRR2868004 | Drought Stress (root) | 0.945 |
| SRR2967015 | Control (root) | 1.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.017 |
| SRR9715740 | Leaf | 0.784 |
| SRR9715741 | Leaf | 1.702 |
| SRR9715739 | Root | 0.051 |
| SRR9715742 | Root | 14.474 |
| SRR9715743 | Root | 8.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.650 |
| SRR8400027 | Control - Root | 182.929 |