Gene detail information of Glyur002887s00038683 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66330.2 | 3.00E-92 | senescence-associated family protein |
| NR | XP_004490814.1 | 0 | PREDICTED: uncharacterized protein LOC101498134 [Cicer arietinum] |
| trEMBL | tr|K7KAJ8|K7KAJ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41250.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02887 | 22345 | 30670 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.775 |
| SRR1783600 | control | 12.892 |
| SRR1783602 | moderate drought stress | 14.082 |
| SRR1811619 | moderate drought stress | 13.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.393 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.374 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.310 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.487 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 62.412 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.755 |
| SRR2868004 | Drought Stress (root) | 30.355 |
| SRR2967015 | Control (root) | 30.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 84.716 |
| SRR9715740 | Leaf | 151.511 |
| SRR9715741 | Leaf | 88.944 |
| SRR9715739 | Root | 3.185 |
| SRR9715742 | Root | 10.116 |
| SRR9715743 | Root | 9.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.676 |
| SRR8749028 | MeJA induced 9h | 22.466 |
| SRR8749029 | MeJA induced 9h | 18.880 |
| SRR8749030 | Uninduced | 13.759 |
| SRR8749031 | Uninduced | 5.290 |
| SRR8749032 | Uninduced | 7.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.336 |
| SRR8400027 | Control - Root | 28.615 |