Gene detail information of Glyur002887s00038680 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH28241.1 | 4.25E-21 | GASA/GAST/Snakin [Medicago truncatula] |
| trEMBL | tr|A0A072UFN3|A0A072UFN3_MEDTR | 2.00E-21 | GASA/GAST/Snakin {ECO:0000313|EMBL:KEH28241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02887 | 8845 | 10096 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1746.073 |
| SRR1783600 | control | 1755.141 |
| SRR1783602 | moderate drought stress | 221.924 |
| SRR1811619 | moderate drought stress | 220.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 517.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 516.399 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.238 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 232.578 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 234.194 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.436 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 152.495 |
| SRR2868004 | Drought Stress (root) | 45.827 |
| SRR2967015 | Control (root) | 61.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.366 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.150 |
| SRR9715739 | Root | 27.869 |
| SRR9715742 | Root | 19.702 |
| SRR9715743 | Root | 18.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 648.098 |
| SRR8749028 | MeJA induced 9h | 257.146 |
| SRR8749029 | MeJA induced 9h | 352.652 |
| SRR8749030 | Uninduced | 11.608 |
| SRR8749031 | Uninduced | 3.219 |
| SRR8749032 | Uninduced | 6.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 963.781 |
| SRR8400027 | Control - Root | 965.224 |