Gene detail information of Glyur002883s00039142 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CBI18508.3 | 3.84E-06 | unnamed protein product [Vitis vinifera] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02883 | 16550 | 17142 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.432 |
| SRR1783600 | control | 5.840 |
| SRR1783602 | moderate drought stress | 8.260 |
| SRR1811619 | moderate drought stress | 9.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.936 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.632 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.328 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.749 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.374 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.703 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.083 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.073 |
| SRR8749029 | MeJA induced 9h | 0.790 |
| SRR8749030 | Uninduced | 0.320 |
| SRR8749031 | Uninduced | 0.102 |
| SRR8749032 | Uninduced | 1.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.024 |
| SRR8400027 | Control - Root | 0.035 |