Gene detail information of Glyur002883s00039139 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006576382.1 | 1.26E-21 | PREDICTED: transcription factor TCP9-like [Glycine max] |
| Swissprot | tr|Q9LT89|TCP19_ARATH | 2.00E-06 | Transcription factor TCP19 |
| trEMBL | tr|I1JKG8|I1JKG8_SOYBN | 5.00E-22 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G02090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02883 | 6129 | 6347 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.560 |
| SRR1783600 | control | 4.504 |
| SRR1783602 | moderate drought stress | 10.257 |
| SRR1811619 | moderate drought stress | 10.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.495 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.897 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.236 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.964 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.573 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.745 |
| SRR2868004 | Drought Stress (root) | 19.077 |
| SRR2967015 | Control (root) | 20.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.684 |
| SRR9715740 | Leaf | 25.589 |
| SRR9715741 | Leaf | 22.570 |
| SRR9715739 | Root | 17.288 |
| SRR9715742 | Root | 22.520 |
| SRR9715743 | Root | 22.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.815 |
| SRR8749028 | MeJA induced 9h | 0.841 |
| SRR8749029 | MeJA induced 9h | 3.854 |
| SRR8749030 | Uninduced | 2.292 |
| SRR8749031 | Uninduced | 0.250 |
| SRR8749032 | Uninduced | 3.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.799 |
| SRR8400027 | Control - Root | 7.416 |