Gene detail information of Glyur002880s00044832 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20090.2 | 7.00E-18 | Uncharacterised protein family (UPF0041) |
| NR | AFK43028.1 | 1.72E-36 | unknown [Lotus japonicus] |
| Swissprot | tr|Q949R9|MPC1_ARATH | 2.00E-22 | Mitochondrial pyruvate carrier 1 {ECO:0000305} |
| trEMBL | tr|I3T3P0|I3T3P0_LOTJA | 6.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:AFK47132.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02880 | 469 | 4151 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002880s00044832.1 | PF03650.8 | MPC | 4 | 60 | 1.80E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.791 |
| SRR1783600 | control | 1.832 |
| SRR1783602 | moderate drought stress | 4.514 |
| SRR1811619 | moderate drought stress | 4.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.365 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.458 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.903 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.930 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.524 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.423 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.655 |
| SRR2868004 | Drought Stress (root) | 72.916 |
| SRR2967015 | Control (root) | 110.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.682 |
| SRR9715740 | Leaf | 16.707 |
| SRR9715741 | Leaf | 17.418 |
| SRR9715739 | Root | 9.370 |
| SRR9715742 | Root | 9.558 |
| SRR9715743 | Root | 10.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.031 |
| SRR8749030 | Uninduced | 0.052 |
| SRR8749031 | Uninduced | 0.423 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.163 |
| SRR8400027 | Control - Root | 39.087 |