Gene detail

Gene detail information of Glyur002867s00037023.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G28030.1	5.00E-91	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	KHN34770.1	2.38E-158	hypothetical protein glysoja_032946 [Glycine soja]
COG	YP_007144194.1	6.00E-14	N-acetyltransferase GCN5 [Crinalium epipsammum PCC 9333]
trEMBL	tr\|I1LVV8\|I1LVV8_SOYBN	9.00E-159	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G01490.1}

Sequence

Transcript Sequence

>Glyur002867s00037023.1
CCAAAATTAGACAACAGAATTTACAAAGGCAGAGGAGGAGGAAGAAGAAGGATAACAATAACATAGAAAGAATGGTGCTGCTTTCTTCTCTCTGTTCCTCTCCTCCAATTCCAATTCCAATTCCAATTCCAATTCCAATTCCAATTCCAATTCCTTCATCTGCGTTTCCAAATTCTTCTGCATTGACATCGAATTTCCACGCTTTCTCCAACCTCAGGACCCAAATCCAATCCTCTGCTTCCACCAACATTTGCACCCNAAAAATCGACACCTCTTTCCTCACCATCGCCGAGTCCTTCTACGAGGATGAACTCTGGGCCGCTGCCTCCCTCCGCGTTCGTTCCTTCCACCAATTCCGCCCCGACACCTTCGGAGTCCAAGATCATGCGAGGTACTTGGCTGAGCGCGAGTTTGAAGCACTTAAGGAGCGTGTTTCGGGGAAAAGAATGGGCTTTACAAAAGTCTCTTGCATAAATGCTTCCCTTCCTCTCTCCCACATATCCAACCTCAACGATGATTTATGCTCTTCATGTAAGTTTTCTGCCAATGGAGAAGACCGGATTGTAGTTGGCTCTCTTGATCTTAATCAGTGCTTGAGCCTTCCTGATGAAATTGTAGGGATGAAGCCAGAGGTCATTGGAGCTGACATTACAAGGGCCTACCTCAGTAATGTATGTGTTGCTAGAGAGTTGCACAGAAATGGGTTGGGCTATGCACTTCTTGAGAAGTCAAAGTTAGTTGCTCGTGATTGGGGCATAACAGATTTGTACGTCCATGTTGCTGTTGACAATGAACCAGCAAAGAACTTGTACACGAAGAGCGGGTTTGTCTATGAAAGTGATGAACCTGCGTGGCAAGCCAGGTTTCTAGATCGACCCCGAAGACTTCTCCTATGGACGGGTCTTTCAAGCACCTAATTTGTCAGTGTTGCCCTGTATCTTATCTTGTGTTAATATGGTTTTCTGTGTCTCCTTGTTATGTTATTTTCACAACATTCCTACCTTGCCTCGTTAGTTCTCCTTCCTTTCATTGCAAAGCCCAATGAATAATGAAACATGGGGTGGCTTCCCCTTGATGATTATTTTTTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02867	6528	9378	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002867s00037023.1	PF00583.19	Acetyltransf_1	193	252	3.70E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.791
SRR1783600	control	7.735
SRR1783602	moderate drought stress	5.238
SRR1811619	moderate drought stress	5.444

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.526
DRR006520	Root Summer glycyrrhizin high producing strain	9.179
DRR006521	Root Winter glycyrrhizin high producing strain	6.253
DRR006522	Root Winter glycyrrhizin high producing strain	6.234
DRR006523	Root Summer glycyrrhizin low producing strain	4.366
DRR006524	Root Summer glycyrrhizin low producing strain	4.190
DRR006525	Leaf Summer glycyrrhizin high producing strain	44.937
DRR006526	Leaf Summer glycyrrhizin high producing strain	45.260

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.221
SRR2868004	Drought Stress (root)	13.717
SRR2967015	Control (root)	13.368

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.042
SRR9715740	Leaf	32.658
SRR9715741	Leaf	27.740
SRR9715739	Root	7.354
SRR9715742	Root	3.369
SRR9715743	Root	4.595

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.755
SRR8749028	MeJA induced 9h	5.253
SRR8749029	MeJA induced 9h	4.549
SRR8749030	Uninduced	11.930
SRR8749031	Uninduced	8.701
SRR8749032	Uninduced	7.863

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.342
SRR8400027	Control - Root	13.574