Gene detail

Gene detail information of Glyur002860s00039119

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G17540.1	1.00E-61	HXXXD-type acyl-transferase family protein
NR	XP_003516503.1	9.08E-166	PREDICTED: anthraniloyl-CoA:methanol acyltransferase-like [Glycine max]
Swissprot	tr\|Q3ZPN4\|ACMAT_VITLA	3.00E-110	Methanol O-anthraniloyltransferase
trEMBL	tr\|I1J859\|I1J859_SOYBN	3.00E-166	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G35530.1}

Sequence

Transcript Sequence

>Glyur002860s00039119.1
ATGGCTTCCTCCTATTCTAGTGGTATAGTCGTAAGGCATAGTGAACCGCAACTGGTGGTGCCTGCAGAACCAACTCCAAGTGAAGTAAAGCAGCTTTCAGACATAGATGACCAAGAAGGGCTTCGTATGCACCTCTCGTTCATTATGTTCTACGAAAGCAACCAGAGTACCACGAGCGTAGGTATCAAAAACCCTTCAAAAGTCATCAAAAGAGCCATCTCTCAGGCACTTGTTCCCTATTACCCATTGGCTGGTAGGCTGATCCAAGGCCTAACAGAAAGCTCTTGGTGGATTGTTGTGCTGAGGGAGTTTTCTGAGGCAGATGTTACCTTGAAGCAGCTAGGTGACTCAATTGCACCGCCATGTCCATATAGGAAATACTTTCTCTGCCATGTAACTCGTTTCTCATGCGGAGGATTCGCATTTGCTGTGCGCATGAACCATGTGGTGTGTGACTCCTTTGGCCTGGTTCAGTTCCTCAACAAGGTGGGAACAACGGGAGCGTCACATCAGCCACCACCAGTATGGGAAAGAGAAATATTCAGTGCACGAAATCCTCCACGAGTCACTTGCACCCACCACGAATACGAGGATGTCACTGTTGCCGCCGACCACAGTGCTTTGGGCCGCATGGCCCACAAATCCTTCTTCTTTGGGCCCAAACAGATTCTCTCCCTTCGGAAGCGTCTCCCCCATACCCTTCAGAAATGCTCAACTTTCGAGTTGCTCTCCGCATGTTTGTGGAAATGCCGCACCGTGGCACTTGACTTAGACGACCCCAATGAAGTTGTTGGTTTGTCTTGCTTTATCACTGCTCATGGCAAGGTGAAAGTGCCCAATGGGTACTACGGCAACGCGTTTGTAACCCGTCTAACGTGTGGAGGATTTGTCCTTACTACACGCATGAACCACACTATGTGCGACTCACTAGGGCTGGTCCAATTCCTCACCATGGTGGGTGAGATAGCAAGAGGTGCTTCTATATCACAGTTCCCAGTGTGGCAAAGAGAACTATTAAGTGCACGCGACCCACCAAGAATCACTTGTGCACACCACGAATATGATCATCATGAAATTGTGCATTGCAACAAAGAAACAACAACAAACAACGACGAAATGGCCCATGAGTCCTTTTTCTTTGGCCCAAAAGAGATTGAATCCATTCGGAATCAACTTCCTCTGAACCTTAGGAAATGCTCAACTTTTGAGATACTCTCTGCTTACTTATGGAAGTGTCGCACCAAAGCACTTGAGCTAAATCCAAATGAGATAGTGGGCTTATCACCCTTTATCACTGCTCATGGTAAGCACGGTCTAGAAGTGCCTAATGGATACTATGGCAATGCCTTTGTCTTCCCGATTGCGCTCTCAAAGGCTGGGCTTTTGTGCCAAAGCCCATTGGGCTATGCATTGGGCTTGATCAAAAAGGCAAAGGCCCAAATGAGCGCCGAGTACATGCGCTCTGTGGCTGATTTTATGGTCCTCAAGGGTCGCCCCAAGTATAGGACAAAAGGGAACTACCTAGTTGGTGACACTACTCATGTGGGGTTTAATAATGTGGATTTTGGGTGGGGAGAGCCTATCTATGGAGGCCCTGCAGGAGCCATACCATTTGTTAGCTTCTATGGACGATTCAGAAACAGTGAAGGTGAAGATAGAATCGTGGTGCCAATATTGTTGCCCCGCCCTGTCATGAACAAGTTTCATTCTGAGCTAGTGAGAATCACAACCAAGGAGAATGTGGATATGAAAATGGCAAATAGGTCCATGTTGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02860	17243	26591	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002860s00039119.1	PF02458.10	Transferase	11	89	4.70E-16
Glyur002860s00039119.1	PF02458.10	Transferase	288	571	1.00E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.361
SRR1783600	control	0.403
SRR1783602	moderate drought stress	0.416
SRR1811619	moderate drought stress	0.408

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.650
DRR006520	Root Summer glycyrrhizin high producing strain	0.480
DRR006521	Root Winter glycyrrhizin high producing strain	0.195
DRR006522	Root Winter glycyrrhizin high producing strain	0.355
DRR006523	Root Summer glycyrrhizin low producing strain	0.590
DRR006524	Root Summer glycyrrhizin low producing strain	0.646
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.203
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.295

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.028
SRR2868004	Drought Stress (root)	0.014
SRR2967015	Control (root)	0.014

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	34.968
SRR9715740	Leaf	23.528
SRR9715741	Leaf	25.329
SRR9715739	Root	0.056
SRR9715742	Root	0.067
SRR9715743	Root	0.069

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.102
SRR8749028	MeJA induced 9h	0.182
SRR8749029	MeJA induced 9h	0.112
SRR8749030	Uninduced	0.065
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.046

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.105
SRR8400027	Control - Root	0.072