Gene detail information of Glyur002859s00040543 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29720.1 | 5.00E-05 | Leucine-rich repeat transmembrane protein kinase |
| NR | XP_006449565.1 | 7.04E-07 | hypothetical protein CICLE_v10016248mg [Citrus clementina] |
| Swissprot | tr|Q9ASQ6|Y1972_ARATH | 8.00E-06 | Probable LRR receptor-like serine/threonine-protein kinase At1g29720 (Precursor) |
| trEMBL | tr|V4UF55|V4UF55_9ROSI | 3.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:ESR62805.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02859 | 26905 | 27806 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.742 |
| SRR1783600 | control | 2.299 |
| SRR1783602 | moderate drought stress | 1.694 |
| SRR1811619 | moderate drought stress | 2.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.859 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.600 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.541 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.564 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.428 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.615 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.053 |
| SRR2868004 | Drought Stress (root) | 1.206 |
| SRR2967015 | Control (root) | 0.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.286 |
| SRR9715740 | Leaf | 0.841 |
| SRR9715741 | Leaf | 1.284 |
| SRR9715739 | Root | 0.351 |
| SRR9715742 | Root | 1.342 |
| SRR9715743 | Root | 1.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.689 |
| SRR8400027 | Control - Root | 1.979 |