Gene detail information of Glyur002851s00042083 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23520.1 | 4.00E-101 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| NR | XP_004509190.1 | 7.67E-149 | PREDICTED: uncharacterized protein LOC101490535 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7CF39|V7CF39_PHAVU | 3.00E-147 | Uncharacterized protein {ECO:0000313|EMBL:ESW27978.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02851 | 32016 | 33072 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.766 |
| SRR1783600 | control | 2.806 |
| SRR1783602 | moderate drought stress | 3.087 |
| SRR1811619 | moderate drought stress | 2.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.232 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.240 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.952 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.646 |
| SRR2868004 | Drought Stress (root) | 14.471 |
| SRR2967015 | Control (root) | 17.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.162 |
| SRR9715740 | Leaf | 4.923 |
| SRR9715741 | Leaf | 3.766 |
| SRR9715739 | Root | 2.190 |
| SRR9715742 | Root | 11.003 |
| SRR9715743 | Root | 10.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.761 |
| SRR8749028 | MeJA induced 9h | 2.990 |
| SRR8749029 | MeJA induced 9h | 1.070 |
| SRR8749030 | Uninduced | 0.780 |
| SRR8749031 | Uninduced | 0.172 |
| SRR8749032 | Uninduced | 0.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.114 |
| SRR8400027 | Control - Root | 11.779 |