Gene detail

Gene detail information of Glyur002831s00039360

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24220.2	2.00E-114	purine permease 5
NR	XP_004488889.1	0	PREDICTED: probable purine permease 5-like [Cicer arietinum]
Swissprot	tr\|Q9ZUH3\|PUP5_ARATH	9.00E-152	Probable purine permease 5
trEMBL	tr\|I1LT42\|I1LT42_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G23920.1}

Sequence

Transcript Sequence

>Glyur002831s00039360.1
ATCAAACAGAAGTTTCACTGACGCACCAACAAATACACACACAGGTGTGTCTATTTTCCCCCATGGTGGTATAGAATCAGGTCTTTCTCCCCAAGCCGAGTGTCATGCTGTCTGTCCCCCTCCTCGAACCTGCAGAAACTATGGAGGCAGAAGAACCACCAATTCCCTCAGAGTCACTCTGGGGTCAGATTTCCAAATTTACAACCATGGTGACGGCAGCATACAAAAGAAAGCCAATCCCTTATTGGATCCTTCTTGTTCTTGGCATCATCGCGATGCTCGTGGCATTTCCTGCTTCCAGCATTCTATCTCGTGTGTACTATTCCAATGGTGGCCAGAGCAAGNGGATCATATCTTGGATAGCTGTTGCTGGATGGCCTCTAATTGCCTTGATACTTCTTCCTACATACCTCATTAGCAAAACCTCTCCCACCCCTCTTAGCTTCAAACTAGTTCTATCTTATGTTGTTTTGGGTTTTCTAAGTGCTGCTGACAACCTCATGTATGCTTATGCNTATGCTTACCTCCCCGCATCTACCGCCGCGCTTGTGGCATCATCATCCCTCGTGTTTTCCACACTTTTCGGGTACCTTCTTGTGAAGAATAGAGTGAATGCTTCTATAATAAATGCTCTCTTTGTCATAACTGCTGCATTGACCATCATTGCCTTGGACTCAAGTTCAGACAGATATGGTAACATCAGTGACAGTGAATACATCATGGGGTTCATATGGGACATTCTTGGATCTGCTCTTCATGGTCTTATATTTGCACTCTCTGAGCTGGTTTTTGTCAAGCTACTTGGAAGAAGGTCCTTCCTTGTTGTTCTGGAACAGCAAGTCATGGTTTCACTATTTGCATTTTTGTTCACCACTGTAGGGACGATTGTGAGTGGTGATTTTCAAGGAATGGCATCTGAGGCTACCACTTTCAAAGGTGGTAGAGGTGCTTATTATCAAGTTCTCATCTGGGGTGCAATCACTTTTCAGCTTGGGGTGCTTGGGGGAACTGCTGTGATCTTCTTGGCTTCTACTGTGCTAGCTGGTGTGCTTAATGCAATAAGAACACCTATAACAAGCATTGCTGCTGTTATACTGCTACATGATCCAATGAGTGGTTTCAAGATCCTCTCCCTCTTGATTACCTTTTGGGGATTTGGCTCATACATTTATGGCAGTTCTATGGATGAAAAATCATCATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02831	19689	22400	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002831s00039360.1	PF00892.15	EamA	84	187	4.80E-06
Glyur002831s00039360.1	PF03151.11	TPT	207	356	1.30E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.965
SRR1783600	control	20.172
SRR1783602	moderate drought stress	11.065
SRR1811619	moderate drought stress	11.006

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.813
DRR006520	Root Summer glycyrrhizin high producing strain	20.420
DRR006521	Root Winter glycyrrhizin high producing strain	8.649
DRR006522	Root Winter glycyrrhizin high producing strain	8.380
DRR006523	Root Summer glycyrrhizin low producing strain	16.774
DRR006524	Root Summer glycyrrhizin low producing strain	16.091
DRR006525	Leaf Summer glycyrrhizin high producing strain	41.554
DRR006526	Leaf Summer glycyrrhizin high producing strain	41.668

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.554
SRR2868004	Drought Stress (root)	12.483
SRR2967015	Control (root)	14.074

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	22.293
SRR9715740	Leaf	49.148
SRR9715741	Leaf	36.336
SRR9715739	Root	26.395
SRR9715742	Root	16.915
SRR9715743	Root	18.658

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.910
SRR8749028	MeJA induced 9h	7.516
SRR8749029	MeJA induced 9h	3.504
SRR8749030	Uninduced	4.574
SRR8749031	Uninduced	3.925
SRR8749032	Uninduced	2.614

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.262
SRR8400027	Control - Root	16.192