Gene detail information of Glyur002825s00035775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13810.1 | 1.00E-15 | Restriction endonuclease, type II-like superfamily protein |
| NR | KEH37331.1 | 8.83E-75 | type II superfamily restriction endonuclease [Medicago truncatula] |
| trEMBL | tr|A0A072V6U1|A0A072V6U1_MEDTR | 3.00E-75 | Type II superfamily restriction endonuclease {ECO:0000313|EMBL:KEH37331.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02825 | 2794 | 9432 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.709 |
| SRR1783600 | control | 1.594 |
| SRR1783602 | moderate drought stress | 1.391 |
| SRR1811619 | moderate drought stress | 1.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.656 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.439 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.568 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.942 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.853 |
| SRR2868004 | Drought Stress (root) | 2.081 |
| SRR2967015 | Control (root) | 2.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.553 |
| SRR9715740 | Leaf | 3.432 |
| SRR9715741 | Leaf | 2.572 |
| SRR9715739 | Root | 0.306 |
| SRR9715742 | Root | 0.675 |
| SRR9715743 | Root | 1.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.279 |
| SRR8749028 | MeJA induced 9h | 0.645 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.374 |
| SRR8749031 | Uninduced | 0.250 |
| SRR8749032 | Uninduced | 0.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.743 |
| SRR8400027 | Control - Root | 2.887 |