Gene detail information of Glyur002815s00044336 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16010.1 | 8.00E-47 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein |
| NR | XP_004516219.1 | 5.05E-82 | PREDICTED: very-long-chain enoyl-CoA reductase-like [Cicer arietinum] |
| Swissprot | tr|Q2QDF6|DET2_GOSHI | 3.00E-18 | Steroid 5-alpha-reductase DET2 |
| trEMBL | tr|G7KJ00|G7KJ00_MEDTR | 9.00E-81 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein {ECO:0000313|EMBL:AES75395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02815 | 16915 | 18624 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002815s00044336.1 | PF02544.11 | Steroid_dh | 36 | 140 | 2.50E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.084 |
| SRR1783600 | control | 0.129 |
| SRR1783602 | moderate drought stress | 0.092 |
| SRR1811619 | moderate drought stress | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.522 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.637 |
| SRR2868004 | Drought Stress (root) | 0.653 |
| SRR2967015 | Control (root) | 0.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.965 |
| SRR9715740 | Leaf | 19.688 |
| SRR9715741 | Leaf | 9.619 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.229 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.713 |
| SRR8400027 | Control - Root | 0.412 |