Gene detail information of Glyur002808s00038001


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52300.12.00E-62ATP synthase D chain, mitochondrial
NRAFK35709.12.78E-106unknown [Lotus japonicus]
Swissprottr|Q9FT52|ATP5H_ARATH5.00E-96ATP synthase subunit d, mitochondrial
trEMBLtr|I3S617|I3S617_LOTJA1.00E-106Uncharacterized protein {ECO:0000313|EMBL:AFK35709.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold028083034633100-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0015986  ATP synthesis coupled proton transport


cellular_component

GO:0000276  mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)


molecular_function

GO:0015078  hydrogen ion transmembrane transporter activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002808s00038001.1PF05873.7Mt_ATP-synt_D171554.80E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control93.013
SRR1783600control93.684
SRR1783602moderate drought stress51.694
SRR1811619moderate drought stress51.975

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain130.416
DRR006520Root Summer glycyrrhizin high producing strain129.330
DRR006521Root Winter glycyrrhizin high producing strain82.184
DRR006522Root Winter glycyrrhizin high producing strain79.848
DRR006523Root Summer glycyrrhizin low producing strain107.389
DRR006524Root Summer glycyrrhizin low producing strain106.096
DRR006525Leaf Summer glycyrrhizin high producing strain150.448
DRR006526Leaf Summer glycyrrhizin high producing strain150.707

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)379.807
SRR2868004Drought Stress (root)277.174
SRR2967015Control (root)221.360

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf251.788
SRR9715740Leaf198.220
SRR9715741Leaf202.805
SRR9715739Root17.854
SRR9715742Root56.322
SRR9715743Root49.407

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h334.685
SRR8749028MeJA induced 9h260.673
SRR8749029MeJA induced 9h297.662
SRR8749030Uninduced260.333
SRR8749031Uninduced169.596
SRR8749032Uninduced125.328

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root261.880
SRR8400027Control - Root265.949

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved