Gene detail information of Glyur002804s00041057 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH40675.1 | 2.06E-64 | pollen protein Ole E I-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072VRB2|A0A072VRB2_MEDTR | 8.00E-65 | Pollen protein Ole E I-like protein {ECO:0000313|EMBL:KEH40675.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02804 | 23565 | 27662 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002804s00041057.1 | PF01190.12 | Pollen_Ole_e_I | 369 | 437 | 6.90E-07 |
| Glyur002804s00041057.2 | PF01190.12 | Pollen_Ole_e_I | 232 | 300 | 5.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 186.319 |
| SRR1783600 | control | 188.850 |
| SRR1783602 | moderate drought stress | 270.870 |
| SRR1811619 | moderate drought stress | 268.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 184.083 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 178.635 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.092 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 105.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 112.953 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.799 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 456.057 |
| SRR2868004 | Drought Stress (root) | 413.285 |
| SRR2967015 | Control (root) | 443.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.441 |
| SRR9715740 | Leaf | 0.234 |
| SRR9715741 | Leaf | 0.628 |
| SRR9715739 | Root | 28.806 |
| SRR9715742 | Root | 118.133 |
| SRR9715743 | Root | 92.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.343 |
| SRR8749028 | MeJA induced 9h | 87.490 |
| SRR8749029 | MeJA induced 9h | 22.575 |
| SRR8749030 | Uninduced | 174.387 |
| SRR8749031 | Uninduced | 299.789 |
| SRR8749032 | Uninduced | 111.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 130.472 |
| SRR8400027 | Control - Root | 161.017 |