Gene detail information of Glyur002795s00038389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G21930.2 | 3.00E-22 | P-type ATPase of Arabidopsis 2 |
| NR | XP_003603219.1 | 1.61E-34 | Copper-exporting P-type ATPase A [Medicago truncatula] |
| COG | YP_007776754.1 | 1.00E-11 | copper-(or silver)-translocating P-type ATPase [Roseburia intestinalis XB6B4] |
| Swissprot | tr|B9DFX7|HMA8_ARATH | 6.00E-25 | Copper-transporting ATPase PAA2, chloroplastic (Precursor) |
| trEMBL | tr|G7J8G2|G7J8G2_MEDTR | 6.00E-35 | Copper-transporting ATPase PAA1, putative {ECO:0000313|EMBL:AES73469.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02795 | 2036 | 3066 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002795s00038389.1 | PF00702.21 | Hydrolase | 19 | 51 | 1.80E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.350 |
| SRR1783600 | control | 9.536 |
| SRR1783602 | moderate drought stress | 7.969 |
| SRR1811619 | moderate drought stress | 8.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.720 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.096 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.011 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.702 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.405 |
| SRR2868004 | Drought Stress (root) | 13.433 |
| SRR2967015 | Control (root) | 14.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.462 |
| SRR9715740 | Leaf | 21.171 |
| SRR9715741 | Leaf | 21.770 |
| SRR9715739 | Root | 6.191 |
| SRR9715742 | Root | 11.195 |
| SRR9715743 | Root | 9.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.374 |
| SRR8749028 | MeJA induced 9h | 3.203 |
| SRR8749029 | MeJA induced 9h | 2.099 |
| SRR8749030 | Uninduced | 3.425 |
| SRR8749031 | Uninduced | 5.141 |
| SRR8749032 | Uninduced | 5.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.509 |
| SRR8400027 | Control - Root | 7.372 |