Gene detail information of Glyur002789s00039174 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55700.1 | 3.00E-30 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_004503216.1 | 1.48E-86 | PREDICTED: UDP-glycosyltransferase 76F1-like [Cicer arietinum] |
| Swissprot | tr|Q9M052|U76F1_ARATH | 2.00E-46 | UDP-glycosyltransferase 76F1 |
| trEMBL | tr|A0A067XTI5|A0A067XTI5_CICAR | 6.00E-87 | UDP-glycosyltransferase {ECO:0000313|EMBL:AGU14094.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02789 | 24772 | 25453 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002789s00039174.1 | PF00201.13 | UDPGT | 150 | 178 | 5.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.989 |
| SRR1783600 | control | 10.029 |
| SRR1783602 | moderate drought stress | 4.505 |
| SRR1811619 | moderate drought stress | 5.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.178 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.848 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.772 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.837 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.696 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.654 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.191 |
| SRR2868004 | Drought Stress (root) | 0.562 |
| SRR2967015 | Control (root) | 0.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.404 |
| SRR9715740 | Leaf | 0.154 |
| SRR9715741 | Leaf | 0.061 |
| SRR9715739 | Root | 0.138 |
| SRR9715742 | Root | 0.200 |
| SRR9715743 | Root | 0.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.252 |
| SRR8749028 | MeJA induced 9h | 1.361 |
| SRR8749029 | MeJA induced 9h | 1.187 |
| SRR8749030 | Uninduced | 0.146 |
| SRR8749031 | Uninduced | 0.123 |
| SRR8749032 | Uninduced | 1.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.375 |
| SRR8400027 | Control - Root | 0.681 |