Gene detail information of Glyur002789s00039170 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05840.1 | 3.00E-157 | Protein of unknown function (DUF620) |
| NR | XP_004503217.1 | 0 | PREDICTED: uncharacterized protein LOC101506207 [Cicer arietinum] |
| trEMBL | tr|I1LML7|I1LML7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02789 | 5274 | 10019 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002789s00039170.1 | PF04788.7 | DUF620 | 126 | 380 | 7.60E-118 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.791 |
| SRR1783600 | control | 0.816 |
| SRR1783602 | moderate drought stress | 0.651 |
| SRR1811619 | moderate drought stress | 0.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.353 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.643 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.993 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.904 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.997 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.801 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.459 |
| SRR2868004 | Drought Stress (root) | 3.921 |
| SRR2967015 | Control (root) | 4.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.403 |
| SRR9715740 | Leaf | 0.391 |
| SRR9715741 | Leaf | 1.533 |
| SRR9715739 | Root | 0.589 |
| SRR9715742 | Root | 0.606 |
| SRR9715743 | Root | 0.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.957 |
| SRR8749028 | MeJA induced 9h | 62.940 |
| SRR8749029 | MeJA induced 9h | 24.889 |
| SRR8749030 | Uninduced | 5.671 |
| SRR8749031 | Uninduced | 2.869 |
| SRR8749032 | Uninduced | 4.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.273 |
| SRR8400027 | Control - Root | 5.397 |