Gene detail information of Glyur002788s00039073 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01710.2 | 4.00E-23 | TPX2 (targeting protein for Xklp2) protein family |
| NR | XP_006599064.1 | 5.54E-130 | PREDICTED: uncharacterized protein LOC102667040 [Glycine max] |
| trEMBL | tr|I1MLP7|I1MLP7_SOYBN | 2.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G06930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02788 | 20741 | 28130 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.930 |
| SRR1783600 | control | 1.007 |
| SRR1783602 | moderate drought stress | 2.389 |
| SRR1811619 | moderate drought stress | 2.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.416 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.730 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.700 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.447 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.401 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.080 |
| SRR2868004 | Drought Stress (root) | 1.848 |
| SRR2967015 | Control (root) | 2.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.107 |
| SRR9715740 | Leaf | 0.040 |
| SRR9715741 | Leaf | 0.201 |
| SRR9715739 | Root | 0.028 |
| SRR9715742 | Root | 0.372 |
| SRR9715743 | Root | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.128 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.193 |
| SRR8749030 | Uninduced | 0.113 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.166 |
| SRR8400027 | Control - Root | 6.393 |