Gene detail information of Glyur002772s00034593 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21360.1 | 9.00E-50 | glycolipid transfer protein 2 |
| NR | XP_004502592.1 | 6.72E-107 | PREDICTED: pleckstrin homology domain-containing family A member 8-like [Cicer arietinum] |
| trEMBL | tr|I1KAL1|I1KAL1_SOYBN | 8.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02772 | 14788 | 16898 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002772s00034593.1 | PF08718.6 | GLTP | 47 | 151 | 7.00E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.922 |
| SRR1783600 | control | 1.944 |
| SRR1783602 | moderate drought stress | 4.902 |
| SRR1811619 | moderate drought stress | 4.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.192 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.091 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.891 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.620 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.513 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.852 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 85.706 |
| SRR2868004 | Drought Stress (root) | 87.950 |
| SRR2967015 | Control (root) | 61.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.748 |
| SRR9715740 | Leaf | 0.992 |
| SRR9715741 | Leaf | 0.674 |
| SRR9715739 | Root | 0.753 |
| SRR9715742 | Root | 0.487 |
| SRR9715743 | Root | 0.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.953 |
| SRR8749028 | MeJA induced 9h | 11.287 |
| SRR8749029 | MeJA induced 9h | 3.433 |
| SRR8749030 | Uninduced | 6.543 |
| SRR8749031 | Uninduced | 6.802 |
| SRR8749032 | Uninduced | 5.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.938 |
| SRR8400027 | Control - Root | 13.005 |