Gene detail information of Glyur002770s00045368 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71090.1 | 1.00E-173 | Auxin efflux carrier family protein |
| NR | XP_004516425.1 | 0 | PREDICTED: uncharacterized protein LOC101511322 [Cicer arietinum] |
| trEMBL | tr|G7JZC9|G7JZC9_MEDTR | 0 | Auxin efflux carrier family protein {ECO:0000313|EMBL:AES97474.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02770 | 7040 | 8404 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002770s00045368.1 | PF03547.13 | Mem_trans | 24 | 444 | 2.70E-86 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.705 |
| SRR1783600 | control | 15.967 |
| SRR1783602 | moderate drought stress | 15.000 |
| SRR1811619 | moderate drought stress | 14.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.194 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.825 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.754 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.679 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.114 |
| SRR2868004 | Drought Stress (root) | 43.535 |
| SRR2967015 | Control (root) | 42.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.568 |
| SRR9715740 | Leaf | 23.301 |
| SRR9715741 | Leaf | 21.272 |
| SRR9715739 | Root | 28.405 |
| SRR9715742 | Root | 21.662 |
| SRR9715743 | Root | 21.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.409 |
| SRR8749028 | MeJA induced 9h | 8.417 |
| SRR8749029 | MeJA induced 9h | 4.468 |
| SRR8749030 | Uninduced | 5.305 |
| SRR8749031 | Uninduced | 3.445 |
| SRR8749032 | Uninduced | 7.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.548 |
| SRR8400027 | Control - Root | 23.711 |