Gene detail information of Glyur002768s00044544 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45270.1 | 2.00E-30 | glycoprotease 1 |
| NR | XP_010661663.1 | 3.78E-37 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2 [Vitis vinifera] |
| Swissprot | tr|O22145|OSGP2_ARATH | 6.00E-36 | Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03179} (Precursor) |
| trEMBL | tr|D7U7W9|D7U7W9_VITVI | 3.00E-37 | Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial {ECO:0000256|HAMAP-Rule:MF_03179} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02768 | 33536 | 34654 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.698 |
| SRR1783600 | control | 9.216 |
| SRR1783602 | moderate drought stress | 18.780 |
| SRR1811619 | moderate drought stress | 18.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.535 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.679 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.903 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.125 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.161 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.614 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.424 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.613 |
| SRR2868004 | Drought Stress (root) | 16.713 |
| SRR2967015 | Control (root) | 13.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.251 |
| SRR9715740 | Leaf | 24.919 |
| SRR9715741 | Leaf | 23.713 |
| SRR9715739 | Root | 4.833 |
| SRR9715742 | Root | 8.638 |
| SRR9715743 | Root | 8.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.189 |
| SRR8749028 | MeJA induced 9h | 11.897 |
| SRR8749029 | MeJA induced 9h | 14.225 |
| SRR8749030 | Uninduced | 8.729 |
| SRR8749031 | Uninduced | 3.175 |
| SRR8749032 | Uninduced | 5.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.528 |
| SRR8400027 | Control - Root | 30.837 |