Gene detail

Gene detail information of Glyur002766s00038232

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24480.1	0	Protein kinase superfamily protein
NR	XP_004490454.1	0	PREDICTED: serine/threonine-protein kinase CTR1-like isoform X1 [Cicer arietinum]
COG	YP_001958461.1	1.00E-41	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q05609\|CTR1_ARATH	2.00E-116	Serine/threonine-protein kinase CTR1
trEMBL	tr\|K7M7T5\|K7M7T5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G36140.2}

Sequence

Transcript Sequence

>Glyur002766s00038232.1
ATGCCACACAGAGCCACTTACTTTTTCCCGAGGCAGTTTCCTGAAAGAGGGTTGGATGAATCTTCAAAGCAGAAACTAGATCACGAGAAGAAGAAACTACTCGTCAACTCAATCAAATCACCACAAGATGCTTTCGGCGCTACTGTTGAAAACGACAGGCTCACTTTCTTAGCTAGCCTTGCTTCCGACCCCGTTCTCACTCTCGACGCTGGAACTGAAACCTGGGATGCCGAAGCCGTTTCGCGTCGTTTATGGGTGACTGGGTGCTTGTCGTACACCGACAAGATATCTGACGGTTTTTACAACATTTTGGGTATGAATCCGTATCTGTGGTTGATGTGCAATGAGGTGGAGGATGAAGGGAAGTGCCTCCCAACTCTGATGGCGCTTAAGGAAGTTGAGCCCACCGAAGCGTCGATGGAAGTGATTCTGGTCGATAGACGCGAGGACTCTCGGCTTAAGGAACTCCAAGATAAAGCTCAGGAGTTGTACTCTGCTTCGGACAATGCCTTGGTGCTGGTTGAAAAGCTGGGAAAACTTGTTGCTATATGTATGGGGGGTACGTTCCCTGTGGAGCAAGGAGGTTTGCATAAGCGGTGGAAGTTGGTTAGTAAGAGGTTGAGAAACTTTCACCAGTGTGTTGTGCTTCCCATAGGTAGTTTGTCTACGGGACTCTGTAGGCATCGCGCGATTCTTTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGCATTGCTCGCGGTTGCAGGTACTGTGCTTCGGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACATGCAGCTGTCAAGGGAATATGTTGTTGACCTGGTTGGGGAACCGGGAAATATCCATGGACCAGATTCCTCAATTAATGGAGCATATGTGTCTTCCACACCTTCCCCATTTCAAGTTTCTCATTTGAGAGAATCCCAATCGCCCTATGTGGATGGTGCAGCATGCTCTCAACCTACAAGGTCTAATCGCAGTTGTGCTATTCCCGACAATCACCTGTATTCAGGTCGTGTACAGGAAGATCAACAAATTAAAGAAACTGGTTTGCTCAAAAATAATAATGGCTCCATATATGCTTCAGTTGATCAAACCTATGGAGGTGTTTCTGAAGCTCTTCGTCCAGCCTTTGAAGCATTATTACATGAAAAGCCCATGCTTGGTAAAGATTCAGTTGTAGTCCAAGAAACTTCTAACAATGAGATCATTGTAAAGGGAAGTTCTGGAGTAAAAAGTAGCTTGAAACAATCTATACTAAGCTCTTCTGGCCAGTCAAAGCAGGAACAGGTAGACAATAGACTTGAAAGCCAGGGGGCTGGGAATATTCCACAATACATGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATACCATGGGAGGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTTGCTGTCAAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTACTCTTCATGGGTGCAGTTACAAAACGGCCCCATCTCTCTATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATTCCGCCTGATACATAGGCCAGCATCTGGTGAACTTATGGATCCAAGGAGAAGAGTACGGATGGCTGTAGACGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATCGTGCACTGGGATCTCAAATCCCCAAACCTGTTAGTAGACAAAAATTGGAATGTAAAGGTCTGTGATTTTGGGTTGTCCAGATTTAAGGCGAATACTTTCTTATCATCAAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCAACAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATCCTGTGGGAACTCGTGACCTTGCAACAACCATGGAATGGACTTAGCCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAATAGGAGACTTGCTATCCCTCCAAACATCTCCCCAGTATTGGCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCTGCTGATCGCCCATCTTTTGCCAGCATTGTTGAGTCACTAAAGAAACTGCTGAAGTCGCCAGTGGATGCAATAAAAATGGGTTGAACATAAGGAGCACACTACACTGCCCATGATTGGGTTTTTTGTTGTTGAAATTTGTTGGCTTCGTTTGGAAATGTTTATTAACAAGGTACCTGACCCTTGTTGGTCATATTCTCGTATTGATGCTGATGGAACCCTTTGGTTGTTTGCAACTGTATATTGGTTGCTTCATGCTTCATACTAACATATTTCTTAAGGGCAATTAAAGCCTTGAAGTCTAGTAACTTGGAAAAAGAGGTGCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02766	19304	27729	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002766s00038232.1	PF14381.1	EDR1	76	287	1.60E-68
Glyur002766s00038232.1	PF07714.12	Pkinase_Tyr	470	706	1.70E-55

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.894
SRR1783600	control	6.798
SRR1783602	moderate drought stress	4.185
SRR1811619	moderate drought stress	4.302

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.462
DRR006520	Root Summer glycyrrhizin high producing strain	2.559
DRR006521	Root Winter glycyrrhizin high producing strain	6.044
DRR006522	Root Winter glycyrrhizin high producing strain	5.987
DRR006523	Root Summer glycyrrhizin low producing strain	2.131
DRR006524	Root Summer glycyrrhizin low producing strain	2.028
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.911
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.928

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.742
SRR2868004	Drought Stress (root)	29.604
SRR2967015	Control (root)	33.816

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.560
SRR9715740	Leaf	1.415
SRR9715741	Leaf	2.102
SRR9715739	Root	7.353
SRR9715742	Root	4.582
SRR9715743	Root	5.883

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.209
SRR8749028	MeJA induced 9h	3.057
SRR8749029	MeJA induced 9h	5.133
SRR8749030	Uninduced	2.947
SRR8749031	Uninduced	3.982
SRR8749032	Uninduced	3.440

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.347
SRR8400027	Control - Root	20.499