Gene detail

Gene detail information of Glyur002756s00040281.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G10930.1	9.00E-131	CBL-interacting protein kinase 5
NR	XP_003547057.1	0	PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Glycine max]
COG	YP_007468874.1	1.00E-38	serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|Q9LEU7\|CIPK5_ARATH	0	CBL-interacting serine/threonine-protein kinase 5
trEMBL	tr\|K7M8Q6\|K7M8Q6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G00581.1}

Sequence

Transcript Sequence

>Glyur002756s00040281.1
CTAAACGGCAAAATCTATTAGCCCCCACAATTGGCTTTAGCCCCACGTCACCGCCACTTGTGTCCTCATCCGGATTTATCCAAATTTCTCCATTTTTGGTTCTTCCAGATATTTCTCAATTTTCTTCCAATCCCTTTTTACTTCCATAAACCATTCATTCCACTTCTACCGGTCAGCTCTCACCTTTCCCTCTTAAACCATCTTCTCTAAACCCCCAACTCCCCAACCCAATCCAACCCAACCCAAGCATTCCCCTGTTTCAATTTNTAATCAATCCCTTCAGTTCAACCCCTCTCTCTCTCTCACACACACCCCTTTATCTTCTTCACCTAATTCAATATTCCTCACCCAATTCAATATCCACCAGCATCATCAAACTCTGTTTTTCAATCTTATTTTCAGTTTCTTCCTCCATTATCAACATACTCTTCTTCATATCATATATATGCACCATGAAGATTTTCAGACCCTCCAAATGTTTCCTTAGGAATGTGGTGTGTCCATCGGACACAAGATTCCTGAGAAAAAGTCAGAACCTATCCCACATGGGTCTAACCCATCTTCGCCAATTCACAATGTCCCTTCTCTCTCGCCCCAATTAGCCACACCCACAAAAAAAAAAAAACTCCACCTTTCTTCACCCCCCTTTCTCCCCCACCATGGATCCATCACAAACCGAACAAAACCCAAACCCAAGAAACATAATCTTCAACAAATACGAGATGGGTCGGGTCCTAGGCCAAGGAAACTTCGCGAAGGTCTACCATGGTAGAAACCTAATAACCAACGAGAGCGTGGCCATAAAGGTTATAAAGAAAGAGAAGCTTAAAAAGGAGAGGCTAGTGAATCAGATCAAGCGTGAGGTCTCAGTGATGCGTCTCGTTCGACACCCAAACATCGTGGAATTCAAGGAAGTTATGGCGACAAAGGGAAAAATCTTCCTCGTCATGGAATACGTCAAAGGCGGTGAACTCTTCTCAAAAGTCGCCAAGGGAAAACTCAGCGAAGAAATCGCAAGAAGGTACTTTCAGCAACTCATTAGTGCTGTGGACTTCTGCCACAGCCGCGGCGTCACCCACCGCGACCTGAAGCCGGAGAATCTTTTACTTGACGAGAAAGAGGACCTTAAAGTCTCCGACTTTGGACTCTCCGCGGTGCCAGAGCAGCGGCGTTCCGACGGGATGCTAATCACGCCGTGTGGGACCCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAAAAGGGCTATGACGGCTCAAAGGCTGATATATGGTCCTGTGGGGTGATCCTCTATGCTCTNCTTTCTGGGTACCTTCCTTTTGAAGGTGAGAATATTGTGAGGATTTATAGAAAGTCCTTCAGGGCAGAGTATGTGTTCCCTGATTGGATTTCAACACAAGCAAAAAACTTGATCTCGAAATTGCTTGTTCCTGATCCTGAAAAGAGGTATTCCATCAATGATATCATGCAAGACCCTTGGTTNCAAATTGGGTTCATGAGACCCATTGCCTTCTCCATGAAGGAGGATCATGTTAATGAAGAGGGTGTTGAAGAAGTTGAAGACATTATTAACAACAATGTTGATGGGGATGAATTGGTGGGGGAGAAGATGGGAAAGGCTAAGCCGGTTCGACCGTTTTACAATGCGTTTGAGATAATTTCATCCTTGTCGCATGGGTTTGATCTTAGGAGTTTGTTTGAGACGAGGAAGCGGTCGCCGTCGATGTTCATATCTATGTTCTCGGCTTCCACGGTGTTGGCGAAGCTTGAGGGGATTGTGAGGAAGATGGGGTTTAGGGTAACGGGGAAGAAGGGCGAGTTTGTGGTGAGGATGGAGGGGGCGAGGGAGGGGAGGAAGGGGAAGCTGGCCGTGACCGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTCGTTGAGTTCTCCAAGTCAGCTGGTGACACGTTAGAGTATGTTAAGTTTTGTGAGGAACAAGTTAGACCTTCTCTTAAAGACATCGTTTGGAGNTGGCAGGGGGATAGTAATAAATAACTCTCAGCACTAGTAGTTAAGGTTTTAAATTGAGATTNCAGTTAGATTGTAATTCTTAATATTGCAGAAAACTATATATGAATGTGATTAATATAGTGGTAATTATGATCAAGATTTAGCCACAAATTGGTATGTGACTGATTGAAACGTTGGTGGTAGTAACATTTGAATATGGTGGTTGTGAACAGAAGAAGGAAAAAAAGATTAAAAAAAGTGAAGTGCATCTTTGACAATTCTTTAGATGATGATCCATAAGTGTAGTTTGGCTAGAATCACCCGATTTCATTTCATACTACTATATGTAAAAAATTGGAGTTTGTGATGGTATGTGCCGAATTCG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02756	17560	20090	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K07198	PRKAA, AMPK	EC:2.7.11.11	FoxO signaling pathway	map04068
			PI3K-Akt signaling pathway	map04151
			AMPK signaling pathway	map04152
			mTOR signaling pathway	map04150
			Autophagy - animal	map04140
			Tight junction	map04530
			Insulin signaling pathway	map04910
			Glucagon signaling pathway	map04922
			Adipocytokine signaling pathway	map04920
			Oxytocin signaling pathway	map04921
			Longevity regulating pathway - mammal	map04211
			Longevity regulating pathway - multiple species	map04213
			Circadian rhythm	map04710
			Fluid shear stress and atherosclerosis	map05418
			Hypertrophic cardiomyopathy (HCM)	map05410
			Non-alcoholic fatty liver disease (NAFLD)	map04932
			Insulin resistance	map04931

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0007165 signal transduction

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002756s00040281.1	PF00069.20	Pkinase	20	273	1.60E-75
Glyur002756s00040281.1	PF03822.9	NAF	326	381	5.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	76.778
SRR1783600	control	76.979
SRR1783602	moderate drought stress	137.745
SRR1811619	moderate drought stress	137.722

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	57.080
DRR006520	Root Summer glycyrrhizin high producing strain	56.092
DRR006521	Root Winter glycyrrhizin high producing strain	209.664
DRR006522	Root Winter glycyrrhizin high producing strain	204.433
DRR006523	Root Summer glycyrrhizin low producing strain	33.363
DRR006524	Root Summer glycyrrhizin low producing strain	33.208
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.766
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.827

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	70.065
SRR2868004	Drought Stress (root)	115.183
SRR2967015	Control (root)	146.882

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.079
SRR9715740	Leaf	25.183
SRR9715741	Leaf	24.846
SRR9715739	Root	50.442
SRR9715742	Root	51.136
SRR9715743	Root	49.275

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	38.413
SRR8749028	MeJA induced 9h	220.946
SRR8749029	MeJA induced 9h	138.917
SRR8749030	Uninduced	24.168
SRR8749031	Uninduced	187.842
SRR8749032	Uninduced	159.475

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	64.905
SRR8400027	Control - Root	75.644