Gene detail information of Glyur002751s00042411 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G25580.1 | 2.00E-129 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| NR | XP_003614420.1 | 0 | NAC domain-containing protein [Medicago truncatula] |
| Swissprot | tr|Q6NQK2|NAC8_ARATH | 2.00E-157 | NAC domain-containing protein 8 |
| trEMBL | tr|G7JX37|G7JX37_MEDTR | 0 | NAC transcription factor-like protein {ECO:0000313|EMBL:AES97378.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02751 | 17892 | 23954 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002751s00042411.1 | PF02365.10 | NAM | 147 | 286 | 5.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.644 |
| SRR1783600 | control | 5.604 |
| SRR1783602 | moderate drought stress | 4.522 |
| SRR1811619 | moderate drought stress | 4.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.746 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.555 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.036 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.763 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.156 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.121 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.430 |
| SRR2868004 | Drought Stress (root) | 27.148 |
| SRR2967015 | Control (root) | 29.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.123 |
| SRR9715740 | Leaf | 25.382 |
| SRR9715741 | Leaf | 28.901 |
| SRR9715739 | Root | 5.318 |
| SRR9715742 | Root | 17.390 |
| SRR9715743 | Root | 15.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.221 |
| SRR8749028 | MeJA induced 9h | 6.287 |
| SRR8749029 | MeJA induced 9h | 6.889 |
| SRR8749030 | Uninduced | 10.500 |
| SRR8749031 | Uninduced | 6.052 |
| SRR8749032 | Uninduced | 3.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.192 |
| SRR8400027 | Control - Root | 25.969 |