Gene detail information of Glyur002749s00036991 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10430.1 | 1.00E-06 | F-box and associated interaction domains-containing protein |
| NR | XP_003637832.1 | 9.35E-39 | F-box protein [Medicago truncatula] |
| trEMBL | tr|G8A0I2|G8A0I2_MEDTR | 3.00E-39 | F-box protein {ECO:0000313|EMBL:AES84970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02749 | 9710 | 12343 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.160 |
| SRR1783600 | control | 0.194 |
| SRR1783602 | moderate drought stress | 0.797 |
| SRR1811619 | moderate drought stress | 0.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.456 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.321 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.208 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.593 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.519 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.687 |
| SRR2868004 | Drought Stress (root) | 3.570 |
| SRR2967015 | Control (root) | 2.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.076 |
| SRR9715740 | Leaf | 4.686 |
| SRR9715741 | Leaf | 4.680 |
| SRR9715739 | Root | 0.544 |
| SRR9715742 | Root | 0.382 |
| SRR9715743 | Root | 0.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.392 |
| SRR8749028 | MeJA induced 9h | 1.980 |
| SRR8749029 | MeJA induced 9h | 1.454 |
| SRR8749030 | Uninduced | 4.567 |
| SRR8749031 | Uninduced | 6.372 |
| SRR8749032 | Uninduced | 5.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.165 |
| SRR8400027 | Control - Root | 1.456 |