Gene detail information of Glyur002747s00042593 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH26002.1 | 1.15E-10 | PIF1 DNA helicase/replication A1-like protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072U8M7|A0A072U8M7_MEDTR | 4.00E-11 | PIF1 DNA helicase/replication A1-like protein, putative {ECO:0000313|EMBL:KEH26002.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02747 | 5236 | 9086 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.082 |
| SRR1783600 | control | 0.322 |
| SRR1783602 | moderate drought stress | 0.091 |
| SRR1811619 | moderate drought stress | 0.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.252 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.873 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.732 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.529 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.100 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.609 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.464 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.114 |
| SRR2868004 | Drought Stress (root) | 17.379 |
| SRR2967015 | Control (root) | 15.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.197 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.005 |
| SRR8749028 | MeJA induced 9h | 0.254 |
| SRR8749029 | MeJA induced 9h | 0.214 |
| SRR8749030 | Uninduced | 0.369 |
| SRR8749031 | Uninduced | 0.198 |
| SRR8749032 | Uninduced | 0.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.566 |
| SRR8400027 | Control - Root | 0.562 |