Gene detail information of Glyur002743s00045803 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25640.1 | 1.00E-56 | Protein of unknown function, DUF617 |
| NR | XP_003518017.1 | 2.53E-139 | PREDICTED: protein MIZU-KUSSEI 1-like [Glycine max] |
| Swissprot | tr|O22227|MIZ1_ARATH | 9.00E-64 | Protein MIZU-KUSSEI 1 |
| trEMBL | tr|I1J6S7|I1J6S7_SOYBN | 9.00E-140 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G22800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02743 | 17304 | 18146 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002743s00045803.1 | PF04759.8 | DUF617 | 117 | 280 | 1.90E-74 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.511 |
| SRR1783600 | control | 11.535 |
| SRR1783602 | moderate drought stress | 8.892 |
| SRR1811619 | moderate drought stress | 8.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.257 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.247 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.131 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.959 |
| SRR2868004 | Drought Stress (root) | 11.874 |
| SRR2967015 | Control (root) | 18.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.419 |
| SRR9715740 | Leaf | 0.355 |
| SRR9715741 | Leaf | 0.230 |
| SRR9715739 | Root | 35.946 |
| SRR9715742 | Root | 9.738 |
| SRR9715743 | Root | 17.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.143 |
| SRR8749028 | MeJA induced 9h | 2.510 |
| SRR8749029 | MeJA induced 9h | 5.651 |
| SRR8749030 | Uninduced | 0.604 |
| SRR8749031 | Uninduced | 0.413 |
| SRR8749032 | Uninduced | 0.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.487 |
| SRR8400027 | Control - Root | 49.948 |