Gene detail information of Glyur002740s00035181 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66910.1 | 8.00E-104 | Protein kinase superfamily protein |
| NR | KEH26997.1 | 0 | receptor-like kinase [Medicago truncatula] |
| COG | YP_001958461.1 | 1.00E-28 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|D7SFH9|GPDL2_ARATH | 2.00E-119 | Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor) |
| trEMBL | tr|A0A072UBL5|A0A072UBL5_MEDTR | 0 | Receptor-like kinase {ECO:0000313|EMBL:KEH26997.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02740 | 24037 | 24951 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.9.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002740s00035181.1 | PF00069.20 | Pkinase | 7 | 222 | 4.80E-46 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.137 |
| SRR1783600 | control | 0.241 |
| SRR1783602 | moderate drought stress | 0.659 |
| SRR1811619 | moderate drought stress | 0.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.507 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.235 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.240 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.619 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.202 |
| SRR2868004 | Drought Stress (root) | 0.674 |
| SRR2967015 | Control (root) | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.487 |
| SRR9715740 | Leaf | 0.069 |
| SRR9715741 | Leaf | 1.036 |
| SRR9715739 | Root | 0.596 |
| SRR9715742 | Root | 6.064 |
| SRR9715743 | Root | 6.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.620 |
| SRR8749028 | MeJA induced 9h | 0.073 |
| SRR8749029 | MeJA induced 9h | 0.199 |
| SRR8749030 | Uninduced | 0.035 |
| SRR8749031 | Uninduced | 0.125 |
| SRR8749032 | Uninduced | 0.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.264 |
| SRR8400027 | Control - Root | 1.787 |