Gene detail information of Glyur002739s00040323 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13670.1 | 1.00E-35 | Protein kinase family protein |
| NR | XP_003552750.1 | 7.19E-48 | PREDICTED: serine/threonine-protein kinase VRK1-like [Glycine max] |
| Swissprot | tr|P42158|KC1D_ARATH | 3.00E-11 | Casein kinase I isoform delta-like |
| trEMBL | tr|I1KZH8|I1KZH8_SOYBN | 5.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G47680.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02739 | 15008 | 25042 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.017 |
| SRR1783600 | control | 3.428 |
| SRR1783602 | moderate drought stress | 2.974 |
| SRR1811619 | moderate drought stress | 3.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.197 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.959 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.019 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.996 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.490 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.917 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.871 |
| SRR2868004 | Drought Stress (root) | 6.898 |
| SRR2967015 | Control (root) | 6.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.704 |
| SRR9715740 | Leaf | 0.148 |
| SRR9715741 | Leaf | 0.613 |
| SRR9715739 | Root | 0.039 |
| SRR9715742 | Root | 0.907 |
| SRR9715743 | Root | 0.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.069 |
| SRR8749028 | MeJA induced 9h | 30.004 |
| SRR8749029 | MeJA induced 9h | 25.024 |
| SRR8749030 | Uninduced | 20.970 |
| SRR8749031 | Uninduced | 13.963 |
| SRR8749032 | Uninduced | 14.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.691 |
| SRR8400027 | Control - Root | 4.783 |