Gene detail information of Glyur002738s00041649 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17250.1 | 5.00E-29 | CCAAT-binding factor |
| NR | XP_004490808.1 | 7.18E-85 | PREDICTED: nucleolar complex protein 4 homolog [Cicer arietinum] |
| trEMBL | tr|I1JHW9|I1JHW9_SOYBN | 2.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02738 | 4889 | 5913 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.587 |
| SRR1783600 | control | 44.632 |
| SRR1783602 | moderate drought stress | 55.011 |
| SRR1811619 | moderate drought stress | 57.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.182 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.055 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.610 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.873 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.289 |
| SRR2868004 | Drought Stress (root) | 14.920 |
| SRR2967015 | Control (root) | 13.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.525 |
| SRR9715740 | Leaf | 6.636 |
| SRR9715741 | Leaf | 11.382 |
| SRR9715739 | Root | 2.583 |
| SRR9715742 | Root | 18.302 |
| SRR9715743 | Root | 16.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.406 |
| SRR8749028 | MeJA induced 9h | 27.314 |
| SRR8749029 | MeJA induced 9h | 18.955 |
| SRR8749030 | Uninduced | 3.497 |
| SRR8749031 | Uninduced | 5.245 |
| SRR8749032 | Uninduced | 4.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.362 |
| SRR8400027 | Control - Root | 24.987 |