Gene detail information of Glyur002729s00042596 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14370.1 | 3.00E-07 | CCT motif family protein |
| NR | XP_004499509.1 | 1.28E-65 | PREDICTED: uncharacterized protein LOC101500857 isoform X2 [Cicer arietinum] |
| trEMBL | tr|V7B8P5|V7B8P5_PHAVU | 1.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:ESW12851.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02729 | 9297 | 10055 | - |
Gene family
| Gene family | subfamily |
|---|---|
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.048 |
| SRR1783600 | control | 0.088 |
| SRR1783602 | moderate drought stress | 0.499 |
| SRR1811619 | moderate drought stress | 0.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.144 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.146 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.225 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.182 |
| SRR2868004 | Drought Stress (root) | 3.906 |
| SRR2967015 | Control (root) | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.294 |
| SRR9715740 | Leaf | 15.330 |
| SRR9715741 | Leaf | 23.929 |
| SRR9715739 | Root | 0.426 |
| SRR9715742 | Root | 0.285 |
| SRR9715743 | Root | 0.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.125 |
| SRR8749028 | MeJA induced 9h | 3.667 |
| SRR8749029 | MeJA induced 9h | 2.379 |
| SRR8749030 | Uninduced | 0.773 |
| SRR8749031 | Uninduced | 0.367 |
| SRR8749032 | Uninduced | 3.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.959 |
| SRR8400027 | Control - Root | 4.735 |