Gene detail information of Glyur002727s00042365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38090.1 | 3.00E-88 | Duplicated homeodomain-like superfamily protein |
| NR | NP_001240137.1 | 6.23E-143 | MYB transcription factor MYB51 [Glycine max] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 8.00E-97 | Transcription factor DIVARICATA |
| trEMBL | tr|C6T984|C6T984_SOYBN | 2.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G14440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02727 | 23799 | 26126 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002727s00042365.1 | PF00249.26 | Myb_DNA-binding | 28 | 73 | 8.90E-07 |
| Glyur002727s00042365.1 | PF00249.26 | Myb_DNA-binding | 137 | 181 | 7.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.939 |
| SRR1783600 | control | 2.991 |
| SRR1783602 | moderate drought stress | 2.225 |
| SRR1811619 | moderate drought stress | 2.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.075 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.756 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.464 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.078 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.392 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.540 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.575 |
| SRR2868004 | Drought Stress (root) | 41.206 |
| SRR2967015 | Control (root) | 34.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.295 |
| SRR9715740 | Leaf | 4.902 |
| SRR9715741 | Leaf | 5.926 |
| SRR9715739 | Root | 5.192 |
| SRR9715742 | Root | 10.941 |
| SRR9715743 | Root | 10.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.942 |
| SRR8749028 | MeJA induced 9h | 4.719 |
| SRR8749029 | MeJA induced 9h | 2.654 |
| SRR8749030 | Uninduced | 0.536 |
| SRR8749031 | Uninduced | 0.223 |
| SRR8749032 | Uninduced | 0.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.242 |
| SRR8400027 | Control - Root | 16.200 |