Gene detail information of Glyur002722s00044429 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59310.1 | 1.00E-21 | lipid transfer protein 4 |
| NR | XP_004506429.1 | 1.54E-54 | PREDICTED: non-specific lipid-transfer protein-like [Cicer arietinum] |
| Swissprot | tr|O23758|NLTP_CICAR | 2.00E-55 | Non-specific lipid-transfer protein (Precursor) |
| trEMBL | tr|I3SVI2|I3SVI2_MEDTR | 1.00E-54 | Non-specific lipid-transfer protein {ECO:0000256|RuleBase:RU000628} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02722 | 19657 | 20625 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002722s00044429.1 | PF00234.17 | Tryp_alpha_amyl | 29 | 113 | 4.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.154 |
| SRR1783600 | control | 0.156 |
| SRR1783602 | moderate drought stress | 0.053 |
| SRR1811619 | moderate drought stress | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.764 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.759 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.154 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1635.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1626.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.283 |
| SRR2868004 | Drought Stress (root) | 3.168 |
| SRR2967015 | Control (root) | 2.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4357.406 |
| SRR9715740 | Leaf | 6058.796 |
| SRR9715741 | Leaf | 5949.777 |
| SRR9715739 | Root | 1.471 |
| SRR9715742 | Root | 131.211 |
| SRR9715743 | Root | 117.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 639.454 |
| SRR8749028 | MeJA induced 9h | 308.311 |
| SRR8749029 | MeJA induced 9h | 296.168 |
| SRR8749030 | Uninduced | 1225.796 |
| SRR8749031 | Uninduced | 1423.332 |
| SRR8749032 | Uninduced | 4838.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.318 |
| SRR8400027 | Control - Root | 65.626 |