Gene detail information of Glyur002720s00042681 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77122.1 | 9.00E-71 | Uncharacterised protein family UPF0090 |
| NR | XP_004502582.1 | 5.25E-140 | PREDICTED: uncharacterized protein LOC101490181 [Cicer arietinum] |
| trEMBL | tr|G7J657|G7J657_MEDTR | 1.00E-136 | DUF150 family protein {ECO:0000313|EMBL:AES72401.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02720 | 1816 | 4594 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002720s00042681.1 | PF02576.12 | DUF150 | 220 | 286 | 3.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.359 |
| SRR1783600 | control | 8.253 |
| SRR1783602 | moderate drought stress | 6.961 |
| SRR1811619 | moderate drought stress | 6.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.007 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.783 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.919 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.299 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.191 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.518 |
| SRR2868004 | Drought Stress (root) | 6.536 |
| SRR2967015 | Control (root) | 5.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.944 |
| SRR9715740 | Leaf | 22.781 |
| SRR9715741 | Leaf | 19.254 |
| SRR9715739 | Root | 4.341 |
| SRR9715742 | Root | 4.446 |
| SRR9715743 | Root | 4.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.403 |
| SRR8749028 | MeJA induced 9h | 1.793 |
| SRR8749029 | MeJA induced 9h | 0.985 |
| SRR8749030 | Uninduced | 1.190 |
| SRR8749031 | Uninduced | 0.577 |
| SRR8749032 | Uninduced | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.996 |
| SRR8400027 | Control - Root | 8.436 |