Gene detail information of Glyur002712s00037646 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20840.1 | 4.00E-26 | Phosphoinositide phosphatase family protein |
| NR | XP_007135384.1 | 1.02E-32 | hypothetical protein PHAVU_010G125000g [Phaseolus vulgaris] |
| Swissprot | tr|Q7XZU1|SAC4_ARATH | 3.00E-29 | Phosphoinositide phosphatase SAC4 |
| trEMBL | tr|K7KZM6|K7KZM6_SOYBN | 2.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G04901.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02712 | 14550 | 16894 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.113 |
| SRR1783600 | control | 2.465 |
| SRR1783602 | moderate drought stress | 1.078 |
| SRR1811619 | moderate drought stress | 2.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.412 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.337 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.992 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.301 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.692 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.497 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.276 |
| SRR2868004 | Drought Stress (root) | 2.718 |
| SRR2967015 | Control (root) | 4.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.904 |
| SRR9715740 | Leaf | 8.239 |
| SRR9715741 | Leaf | 4.971 |
| SRR9715739 | Root | 0.225 |
| SRR9715742 | Root | 1.745 |
| SRR9715743 | Root | 0.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.530 |
| SRR8749028 | MeJA induced 9h | 0.969 |
| SRR8749029 | MeJA induced 9h | 2.151 |
| SRR8749030 | Uninduced | 2.155 |
| SRR8749031 | Uninduced | 2.374 |
| SRR8749032 | Uninduced | 1.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.061 |
| SRR8400027 | Control - Root | 2.678 |