Gene detail

Gene detail information of Glyur002706s00038104.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22380.1	4.00E-130	UDP-glucosyl transferase 85A3
NR	XP_003618663.1	0	Cytokinin-O-glucosyltransferase [Medicago truncatula]
COG	YP_005370382.1	4.00E-07	Zeaxanthin glucosyltransferase [Corallococcus coralloides DSM 2259]
Swissprot	tr\|F8WKW1\|UGT2_GARJA	9.00E-175	7-deoxyloganetin glucosyltransferase
trEMBL	tr\|G7KM84\|G7KM84_MEDTR	0	UDP-glucosyltransferase family protein {ECO:0000313\|EMBL:AES74881.1}

Sequence

Transcript Sequence

>Glyur002706s00038104.1
ATGAGTAATTTTGCTGAGAGAAAACCACATGCTGTGTTGATTCCATATCCACTTCAAGGCCACATTAATCCAATGTTCAAACTAGCAAAGCTGCTTCACCTTAGAGGCTTCCACATAACCTTTGTCAACACTGAGTACAACCACAAACTCTTGCTCAAATCAAGGGGTCCAAACTCCCTTGATGGCTTCCCTGACTTTGTCTTTGAAATCATCCCAGATGATAGTGATGGTGATGGTGATGTTAGTCAAGACCTACACTCTCTTAATGAATCAATAAGAAAGAACTTCCTACACCCCTTTTGTGACCTTCTTGCTAGGCTTAAAGACACTGCCACTGCTGGTCTTATTCCACCAGTTACTTGCTTAGTTTCTGATGGTGCCATGACCTTTACAATACAAGCTGCTGAACAACTTTCACTCCCTATTGCTCTCTTCTGTCCAGCTAGTATGCAAAACTTTAGACTGAAGGACCTTCCTAGCTTCATAAGAACAACAGATCCTAATGATCCAATAGTAGAGTTTCTCATGGAAGTGGAAGATAGAACTCACAAAGCCTCTGCTATTATTTTTAATACTTCTAATGAACTTGAGAGTGATGTAATGAATGCTCTCTCCTCTATGTTCCCTTCTGTTTACCCCATTGGCCCTTTCCTTTCATTTTTAAATCAAATTCCACAGAACCACTTGGCATCCTTAGGTTCCAATCTTTGGAAAGAAGATACCAAGTGTCTTGAATGGCTTGAATCCAAGGAAACAGGTTCTGTTGTTTATGTGAATTTTGGCAGCATGACAGTTATGTCTCCAGAGCTACTCTCGGAGTTTGCTTGGGGTTTGGCCAACAGCAAGCAACCCTTTTTGTGGATCATTAGGCCTGACCTTGTCATTGGTCGCGCCGCGATTTTATCATCCGAGTTTGTGAATGAAACCTATAGAGGCCTAATATCAAGCTGGTGTCCACAAGAGCAAGTGTTGAACCACCCTTCAGTTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCCTTGAAAGCATCTGTGCAGGAGTTCCAATGTTGTGTTGGCCAAATTTTGTAGATCAGCCAACAAACTGTAGATATATTTGCAATGAATGGCAAATTGGGATTGAAATTGATGCCAATGTGAAGAGAGAGGAGGTGGAGAAGCTGGTGAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGCAAAAGGCCATCGAGTTGAAGAAGAAGGCAGAGAAGGACACCGGCCGGGTGGTAGTTCATACATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02706	2520	4433	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002706s00038104.1	PF00201.13	UDPGT	175	402	6.60E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.029
SRR1783602	moderate drought stress	0.080
SRR1811619	moderate drought stress	0.074

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.099
DRR006521	Root Winter glycyrrhizin high producing strain	0.051
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.086
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.036

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.271
SRR2868004	Drought Stress (root)	0.164
SRR2967015	Control (root)	0.668

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.071
SRR9715740	Leaf	0.009
SRR9715741	Leaf	0.020
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.033

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.008
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.134
SRR8400027	Control - Root	0.653