Gene detail information of Glyur002705s00034738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07120.1 | 3.00E-12 | |
| NR | XP_003615748.1 | 3.47E-23 | Protein CHUP1 [Medicago truncatula] |
| trEMBL | tr|V7BCK7|V7BCK7_PHAVU | 2.00E-22 | Uncharacterized protein {ECO:0000313|EMBL:ESW14181.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02705 | 4835 | 5173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.467 |
| SRR1783600 | control | 1.140 |
| SRR1783602 | moderate drought stress | 0.569 |
| SRR1811619 | moderate drought stress | 2.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.338 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.814 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.294 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.572 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.905 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.092 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.041 |
| SRR2868004 | Drought Stress (root) | 1.461 |
| SRR2967015 | Control (root) | 1.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.366 |
| SRR9715740 | Leaf | 0.065 |
| SRR9715741 | Leaf | 0.455 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.498 |
| SRR9715743 | Root | 0.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.316 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.902 |
| SRR8749030 | Uninduced | 0.508 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.196 |
| SRR8400027 | Control - Root | 1.260 |