Gene detail

Gene detail information of Glyur002703s00039085

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G56040.2	2.00E-27	Leucine-rich receptor-like protein kinase family protein
NR	XP_003617883.1	2.18E-33	Receptor protein kinase-like protein [Medicago truncatula]
Swissprot	tr\|C0LGR3\|Y4265_ARATH	3.00E-25	Probable LRR receptor-like serine/threonine-protein kinase At4g26540 (Precursor)
trEMBL	tr\|G7K4S2\|G7K4S2_MEDTR	8.00E-34	LRR receptor-like kinase family protein {ECO:0000313\|EMBL:AET00842.1}

Sequence

Transcript Sequence

>Glyur002703s00039085.1
ATGAACGTTGCCGATCCAGTCTCGGAGGTTGTCGACGGACGGAAGGAGCTTACCACTGAGGTCTCAAAGGATTCAGAATCGGATTCCATCGCTGGCTCTGATTTTGATTCTCTTGAGGCTCCGCTCGACGACGCCATCACCCATCCTCCCCGTTTCTTGCAACCACAGCCAGTTTCAGGAACTACCACTAGACCACCATTGGAGATGCACGAGCACTGGCCCAAGCACTACGGTTTTAACGGCGATGGTAACTTGGAGTTCACCCATCGTTGGCCATCGTTCCCTATTTTGGAAGATGACGACACCGACCCCGACCCCAACATGGATTTGCCAATCATAGACACCCGCCCATATGACCCAGGCACGCATGAGTCACCAAACCCACCGGCAGAGACAAAGCAACCATCAAATCAAGATATAGCGAAATCTGATCTCATCAAGGTTTCCAGACAAGTTGACCCTTCAAGTGCAAGAACATCTGGCATGTCGGCAAATGCTTTGGATGTCCTTGAGGAGCTTGACACAGAGTTAGCTCACCTTGGTAGACTAGTTGGGATGTGGTTTTCTTTGCTCAATTTTTCTGCAAAATGTGGGTTCCCTACTTCTGCATGCCAGGTGCTTGCTGAATTGCCTGAGCAAGATGTTCTCTCTTGGACTGCTGTAACTCAAGGCTGTGTGGCTCAGGGCAATGGTTCAGAAAAGGGACAAGCAGAATGGGTGTCCAATTATGAAGTTGTCTTAGGCCTGACTCAGGTACTTGCATATTTTCCCCATGATTGTGTACCTTTCATGTTGCATGGAGATGTCTCCACCACAAACATGTTATTTGGTCTTGCCTATCATCATTACTTTGCTGACTTGGGCCTGACAAGAATTGCAAGTGAATATGGTGCTAATACTAATTCCAAGAAAATTCAACAACCTCCCTATCTTACTGGGTCCTATGGGTACATGTTTCATGCGCTTGCATCCATGCAGCAAATCCCACATAGTAGTGTTGTGCACTTTTTTGGTGTGGTTCTATTTGAGTTGCTGANAGGAAGGCATCCACTAGTTGTTGGTCTTGTCTGCTTTCAGGCATTGACTATGGAGAATAAATCACAAACAGATAATTTTATTGAAATTTACTTTAGATTTCCTTTGGCCAGTGACAAAGCAAGGATAGATGATTGGGTCCAAGTAAGGCAATATGGAATTATGTATTATTTAGCACTTGGTGACCAGAGGATTGTTGACCAAAATTTCATCATTAAGCCTAAAGCTAAGTTTGAGGGTGGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02703	12354	13730	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.579
SRR1783600	control	5.396
SRR1783602	moderate drought stress	2.612
SRR1811619	moderate drought stress	2.084

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.897
DRR006520	Root Summer glycyrrhizin high producing strain	1.754
DRR006521	Root Winter glycyrrhizin high producing strain	0.934
DRR006522	Root Winter glycyrrhizin high producing strain	1.138
DRR006523	Root Summer glycyrrhizin low producing strain	1.582
DRR006524	Root Summer glycyrrhizin low producing strain	1.255
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.039
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.288

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.015
SRR2868004	Drought Stress (root)	2.538
SRR2967015	Control (root)	2.978

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.992
SRR9715740	Leaf	1.662
SRR9715741	Leaf	0.825
SRR9715739	Root	0.744
SRR9715742	Root	0.976
SRR9715743	Root	1.081

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.634
SRR8749028	MeJA induced 9h	0.432
SRR8749029	MeJA induced 9h	0.577
SRR8749030	Uninduced	0.231
SRR8749031	Uninduced	0.100
SRR8749032	Uninduced	0.089

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.262
SRR8400027	Control - Root	3.928