Gene detail

Gene detail information of Glyur002701s00040535

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14690.1	1.00E-175	cytochrome P450, family 72, subfamily A, polypeptide 15
NR	BAL45206.1	0	cytochrome P450 monooxygenase [Glycyrrhiza uralensis]
COG	YP_004164863.1	1.00E-44	unspecific monooxygenase [Cellulophaga algicola DSM 14237]
Swissprot	tr\|H2DH21\|C7A29_PANGI	0	Cytochrome P450 CYP72A219
trEMBL	tr\|H1A987\|H1A987_GLYUR	0	Cytochrome P450 monooxygenase {ECO:0000313\|EMBL:BAL45206.1}

Sequence

Transcript Sequence

>Glyur002701s00040535.1
AACCAAACCACATAATATAAGCCTCTCTGGTTTTATCATCTCTTCCCCTGTTTCATTTTTGGCCGTAAATCACAAAGGTAAGAAATTATGGAAGCAGTATGGGCCACAACAACAGTAGGCATAATAATTCTCATGGTGATAATACTTGTTGTGATGATATGGGTATGGAGAGTGCTGAATTGGTTATGGCTGAAGCCAAAGAAGCTGGAAAGGGTGCTAAGAGAGCAAGGCCTTAAAGGGAATTCATATAGGTTATTGGTGGGGGACGTTAATGAACTTCTAAAGATGCAAAAGGAAGTCAAATCCAAACCCATGAATCTCTCTGATGATATAGTGCCCCGTGTGTCTCCCTATCTCCAACGAAGTGTCAACATACACGGAAAAAATTCTTTTATCTGGTTTGGACCAATACCAAGGGTGACCCTCATGGATCCTGAGCTAATCAAAGATGTACTTAACAAGATACATGATTTCCCGAAGCCTAATACGAATCCGCTTGTCAGGTTACTAGCTAATGGTCTTGCAAGCCATGGGGGAGTAAAATGGAGCAAACACAGAAGGATAATAAATCCTGCATTCAATTTAGAAAAATTGAAGATCATGTTGCCAATATTCTTCAAAAGTTGCAATGATCTGATTAGCAAATGGGAAGGAATGTTGTCTTCAGATGGATCGTGTGAAATGGATGTGTGGCCTTTCCTTCAGAACTTGGCTAGTGATGTTATATCTCGAACTGCATTTGGAAGTAGTTACGAAGAAGGAAAAAGAGTATTTCAACTTCAAAAGGAGCAAGCTGAACTTACAATGAGAATTATAATGACAGTTTACATCCCTGGATGGAGGTTTCTACCTACTACTATTAATAGGAGGATGAAGGAAATTGACAGGGATGTAAAAGCTTCGCTTAAGGATATNATTAACAAGAGAGACAGAGCACTAAAAGCGGGTGAAGCCTCTAAGAATGACTTGTTAGGTATTCTTCTNGAGTCAAATCACAAGGAAATCCAAGAACATGGGAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAGGAGACCACTTCAGTTCTGCTTGTTTGGACAATGGTGTTATTGAGTAGATACCCTGATTGGCAAGCACGTGCAAGAGAGGAAGTGTTACAAGTCACCATGATTTTGTATGAGGTTCTTAGGTTATACCCACCAGCAATTGGGCTTACTCGAACTGTTCACAAAGATANGAGACTTGGAAACCTAACATTACCTGCTGGAGTGCAAGTTTCCTTACCGATAGTTTTGGTTCACCATAACTGTGAGCTATGGGGTGATGATGCTAAGGAGTTCAATCCTGAGAGATTTTCTGATGGACTTCTAAGAGCAACAAATGGCAGAGTTACATTTTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTGTTGGAAGCAAAGGTAGCTTTGTCAGTGATTTTACAAAATTTCTCATTTGAACTTTCTCCGGCCTATGCTCATGCTCCAAATACAGTAATTACTCTTCAGCCACAATATGGGGCTCATATCATTCTACATAAAGTGGAAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02701	6597	13337	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP72A15

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002701s00040535.1	PF00067.17	p450	98	481	2.90E-73

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.005
SRR1783600	control	3.028
SRR1783602	moderate drought stress	2.093
SRR1811619	moderate drought stress	2.113

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.807
DRR006520	Root Summer glycyrrhizin high producing strain	0.767
DRR006521	Root Winter glycyrrhizin high producing strain	8.181
DRR006522	Root Winter glycyrrhizin high producing strain	7.567
DRR006523	Root Summer glycyrrhizin low producing strain	1.767
DRR006524	Root Summer glycyrrhizin low producing strain	1.758
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.999
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.867

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.513
SRR2868004	Drought Stress (root)	15.942
SRR2967015	Control (root)	11.790

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.981
SRR9715740	Leaf	17.049
SRR9715741	Leaf	8.505
SRR9715739	Root	0.542
SRR9715742	Root	1.052
SRR9715743	Root	1.063

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.017
SRR8749028	MeJA induced 9h	14.913
SRR8749029	MeJA induced 9h	18.753
SRR8749030	Uninduced	21.614
SRR8749031	Uninduced	56.981
SRR8749032	Uninduced	32.842

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.477
SRR8400027	Control - Root	6.154