Gene detail

Gene detail information of Glyur002690s00034713

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01900.1	0	subtilase family protein
NR	XP_006574858.1	0	PREDICTED: subtilisin-like protease-like isoform X1 [Glycine max]
COG	YP_007562288.1	5.00E-116	peptidase S08 family protein [Ilumatobacter coccineus YM16-304]
Swissprot	tr\|O65351\|SUBL_ARATH	0	Subtilisin-like protease (Precursor)
trEMBL	tr\|I1JDQ1\|I1JDQ1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G10340.1}

Sequence

Transcript Sequence

>Glyur002690s00034713.1
ACGAGTTTATTAGCATTCCTTATCCCAAAAACATTTTCTCCTTGTCTTGTACTAACCCCAGCATAGGCATCATGGTCTTTAGGATAGTGTTTCTATTCCTGGCTCTTATGGTGNCAAATTCAATAGCTGTCAAGGCCCAACAGACCTACATAGTACACATGGACAGGACCAAAATCAGGGCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTTTGAATCAATCATTGATTTCATTTCAGAAGCTTCAATGGAGGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAAGAGAGGTTTCAGCACCTCAGCTCCTTTATGCCTATGAAACCAGCATGTTTGGTTTTGCAGCCCATCTTTCTGAGAAACAACTCAAACACTTGAACCAAATGGATGGTTTCCTCTCAGCCATACCTGATGAACTATCAACCCTCCATACAACACACACACCACATTTTCTTGGCCTAACCAATGGGAGAGGACTTTGGAGTGCTCCAAACTTGGCCTCAGATGTGATCATTGGTGTCCTTGACTCAGGTATATGGCCTGANCACATCAGTTTCCAAGACTCAGGTTTGTCCCCAATACCCCATCACTGGAAAGGTGTTTGTGAAAAAGGCACCAAGTTCTCTCCCTCAAATTGTAACAAGAAGCTCATTGGTGCAAGATCCTATTTCAAGGGGTATGAAAAGTACATCGGGAAGATCAACGAGACGACGGATTATCGTTCCCCTAGAGATTCCCAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTGATGTGGTGAAAAATGCAAGCNTTTTTGGCCTTGCTAGAGGTTCAGCAAGTGGAATGAGGTATACCTCAAGAATTGCATCTTATAAAGTGTGTTGGCCNTCTGGCTGTGCAAATTCTGATGTCTTAGCAGCCATGGACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGAGTATTCCTAAGCCTTTTTACAATGATAGCATTGCCATAGCTTCATTTGGGGCAACACAAAATGGGGTTTTTGTTTCTTGCTCTGCAGGCAACTCAGGTCCCTTTGCATCAACAGTTGGGAATGGTGCCCCATGGATCATGACAGTTGCCGCCAGCTACACCGACCGAAGCTTCCCAACAAAAGTGAAACTTGGGAATGCAAAAATTTTTGAAGGGACATCTCTATATATAGGCAAGCAAACAAACCAGTTGCCTCTTGTCTATGGCAAATCAGCAAGTACAAAAAGGGGAGCACAGTTTTGCACAAGAGGCTCCCTTGACTCAAAGATTGTGCATGGAAAGATAGTTGCTTGTGAGAGAGGGTTAAACAGTAGAACTGAGAAGGGTGAGGCAGTAAAAATGGCAGGTGGGGCAGGAATGATACTACTCAACTCTGAAAGCCAAGGGGAAGAGCTTCTTGCTGACCCTCACATTTTGCCAGCAACTTCCTTAGGTGCTTCAGCAGGTAAGGCTATTAGAAGCTACATTGGCTCAGTGAAGAAACCAACAGCTTCAATTTCCTTCNTGGGTACAAGGTATGGTGACACTGCACCAGTGGTAGCAGCATTCTCTTCTAGGGGACCAAGTATAGTGGGACCAGATGTGATTAAGCCAGATGTGACTGCACCTGGTGTGAACATCCTTGCTGCTTGGCCACCCAAAACTAGCCCAAGCNTGCTCAAGAGTGACAAGAGAAGGGTTCTATTCAACATTGTCTCAGGTACCTCAATGTCTTGTCCTCATGTTAGTGGCTTAGCAGCACTGCTTAAATCTGTGCACAAAGATTGGTCTCCTGCAGCTATCAAATCTGCTCTCATGACAACTGCTTACACAATGAACAACAAAGGATCTCCTATCTCAGATCTTGGTTCAGATCACTCACTATTTGCTANCCCCTTTGCATTTGGTTCAGGCCATGTGGACCCTGAAAGTGCTTCTGATCCAGGATTAGTCTATGATATTAGCACCAAAGACTACTTGAATTACTTGTGCAGCCTAAACTATACAACTTCACAGATTGCTCTATTGTCTAGGGGTACATTTGTGTGTCCTAAAAAAGCAGTTCTTCAAGCTGGTGACTTGAACTATCCTTCATTTTCTGTTCTATTTTTCAGTATAACAGCCCNTAATGCTAGTGTGACATACAAGAGAGTTGTCACATATGTTGGAAAACCACCACAAAGTGTTTATGCAGTTAAAGTGGAACACCCAAATGGAGTTCTGGTTACTGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTGAGCTACAAAGTGACATTTTTGGCTTTTGGAAGAGCAAAAGTTGCTGGTACATCATCATTTGGGTCACTGACTTGGGTATCTGGCAAATATAAGTGTCGTTTGGAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02690	23563	26420	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002690s00034713.1	PF05922.11	Inhibitor_I9	25	122	7.20E-08
Glyur002690s00034713.1	PF00082.17	Peptidase_S8	151	603	9.00E-43
Glyur002690s00034713.1	PF02225.17	PA	379	475	6.00E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.198
SRR1783600	control	0.184
SRR1783602	moderate drought stress	0.127
SRR1811619	moderate drought stress	0.127

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.785
DRR006520	Root Summer glycyrrhizin high producing strain	2.843
DRR006521	Root Winter glycyrrhizin high producing strain	0.046
DRR006522	Root Winter glycyrrhizin high producing strain	0.045
DRR006523	Root Summer glycyrrhizin low producing strain	0.508
DRR006524	Root Summer glycyrrhizin low producing strain	0.509
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.412
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.622

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.780
SRR2868004	Drought Stress (root)	3.699
SRR2967015	Control (root)	3.930

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.456
SRR9715740	Leaf	0.129
SRR9715741	Leaf	1.021
SRR9715739	Root	0.021
SRR9715742	Root	0.951
SRR9715743	Root	0.880

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.025
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.493
SRR8400027	Control - Root	2.878