Gene detail information of Glyur002681s00041915 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01150.1 | 3.00E-58 | Protein of unknown function (DUF674) |
| NR | AES87033.2 | 0 | DUF674 family protein [Medicago truncatula] |
| trEMBL | tr|G7JS94|G7JS94_MEDTR | 0 | DUF674 family protein {ECO:0000313|EMBL:AES87033.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02681 | 4904 | 8704 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002681s00041915.1 | PF05056.7 | DUF674 | 2 | 473 | 4.30E-100 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.928 |
| SRR1783600 | control | 1.849 |
| SRR1783602 | moderate drought stress | 0.855 |
| SRR1811619 | moderate drought stress | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.815 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.683 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.695 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.181 |
| SRR2868004 | Drought Stress (root) | 3.022 |
| SRR2967015 | Control (root) | 2.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.854 |
| SRR9715740 | Leaf | 0.078 |
| SRR9715741 | Leaf | 5.836 |
| SRR9715739 | Root | 0.023 |
| SRR9715742 | Root | 31.214 |
| SRR9715743 | Root | 25.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.140 |
| SRR8749028 | MeJA induced 9h | 0.031 |
| SRR8749029 | MeJA induced 9h | 0.013 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.671 |
| SRR8400027 | Control - Root | 3.646 |