Gene detail information of Glyur002665s00038738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35450.1 | 2.00E-05 | Disease resistance protein (CC-NBS-LRR class) family |
| NR | XP_007131448.1 | 2.63E-24 | hypothetical protein PHAVU_011G014200g [Phaseolus vulgaris] |
| trEMBL | tr|V7AD28|V7AD28_PHAVU | 1.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:ESW03442.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02665 | 5629 | 6385 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.506 |
| SRR1783600 | control | 1.326 |
| SRR1783602 | moderate drought stress | 0.813 |
| SRR1811619 | moderate drought stress | 0.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 105.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 99.123 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.998 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.820 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.601 |
| SRR2868004 | Drought Stress (root) | 2.978 |
| SRR2967015 | Control (root) | 20.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.472 |
| SRR9715740 | Leaf | 15.011 |
| SRR9715741 | Leaf | 0.192 |
| SRR9715739 | Root | 16.263 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 3.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.048 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.353 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.040 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.861 |
| SRR8400027 | Control - Root | 34.443 |