Gene detail information of Glyur002651s00039841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26100.1 | 1.00E-33 | Cytochrome b561/ferric reductase transmembrane protein family |
| NR | AFK43807.1 | 6.73E-74 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9C540|ACFR4_ARATH | 1.00E-47 | Probable transmembrane ascorbate ferrireductase 4 |
| trEMBL | tr|I3SU65|I3SU65_LOTJA | 3.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:AFK43807.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02651 | 35632 | 36853 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002651s00039841.1 | PF03188.11 | Cytochrom_B561 | 54 | 135 | 1.80E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.812 |
| SRR1783600 | control | 10.565 |
| SRR1783602 | moderate drought stress | 12.175 |
| SRR1811619 | moderate drought stress | 11.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.630 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.422 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.865 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.138 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.163 |
| SRR2868004 | Drought Stress (root) | 9.417 |
| SRR2967015 | Control (root) | 10.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.249 |
| SRR9715740 | Leaf | 3.756 |
| SRR9715741 | Leaf | 1.630 |
| SRR9715739 | Root | 16.643 |
| SRR9715742 | Root | 11.659 |
| SRR9715743 | Root | 12.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.544 |
| SRR8749028 | MeJA induced 9h | 0.888 |
| SRR8749029 | MeJA induced 9h | 0.714 |
| SRR8749030 | Uninduced | 0.105 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.436 |
| SRR8400027 | Control - Root | 24.816 |