Gene detail information of Glyur002613s00038306 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007146989.1 | 2.29E-12 | hypothetical protein PHAVU_006G087200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BPM6|V7BPM6_PHAVU | 9.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:ESW18983.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02613 | 371 | 1973 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 66.347 |
| SRR1783600 | control | 66.364 |
| SRR1783602 | moderate drought stress | 134.166 |
| SRR1811619 | moderate drought stress | 137.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.597 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.481 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.601 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.773 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.700 |
| SRR2868004 | Drought Stress (root) | 17.251 |
| SRR2967015 | Control (root) | 18.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.948 |
| SRR9715740 | Leaf | 16.383 |
| SRR9715741 | Leaf | 19.697 |
| SRR9715739 | Root | 8.040 |
| SRR9715742 | Root | 17.456 |
| SRR9715743 | Root | 11.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.942 |
| SRR8749028 | MeJA induced 9h | 22.177 |
| SRR8749029 | MeJA induced 9h | 10.001 |
| SRR8749030 | Uninduced | 8.481 |
| SRR8749031 | Uninduced | 9.486 |
| SRR8749032 | Uninduced | 5.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.840 |
| SRR8400027 | Control - Root | 46.184 |